RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
CCM2-207ENST00000475551 TRAV8-3A0A0A6YYJ7 113 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 TMEM61Q8N0U2 210 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 TMEM126AQ9H061 195 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 YAE1D1Q9NRH1 226 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 TRGV11A0A075B6L2 103 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 CD28P10747 220 aa13.06□□□□□ -0.32
CCM2-207ENST00000475551 CHCHD5Q9BSY4 110 aa13.05□□□□□ -0.32
CCM2-207ENST00000475551 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
CCM2-207ENST00000475551 USP9XQ93008 2570 aaPredicted RBP13.04□□□□□ -0.32
CCM2-207ENST00000475551 Q6ZSV7 163 aa13.04□□□□□ -0.32
CCM2-207ENST00000475551 IMUPQ9GZP8 106 aa13.04□□□□□ -0.32
CCM2-207ENST00000475551 SPTBN1Q01082 2364 aaKnown RBP13.04□□□□□ -0.32
CCM2-207ENST00000475551 TIMM17BO60830 172 aa13.04□□□□□ -0.32
CCM2-207ENST00000475551 TMEM101Q96IK0 257 aa13.04□□□□□ -0.32
CCM2-207ENST00000475551 IGHV1OR15-1A0A075B7D0 117 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 ACYP1P07311 99 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 LMO4P61968 165 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 EDA2RQ9HAV5 297 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 K7EMT4 169 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 LINC01587Q99440 93 aa13.03□□□□□ -0.32
CCM2-207ENST00000475551 TRAV12-2A0A075B6T6 113 aa13.01□□□□□ -0.33
CCM2-207ENST00000475551 IGHG2P01859 326 aa13.01□□□□□ -0.33
CCM2-207ENST00000475551 TENM4Q6N022 2769 aa13.01□□□□□ -0.33
CCM2-207ENST00000475551 PF4V1P10720 104 aa13.01□□□□□ -0.33
CCM2-207ENST00000475551 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
CCM2-207ENST00000475551 NPC2P61916 151 aa13□□□□□ -0.33
CCM2-207ENST00000475551 DOPEY1Q5JWR5 2465 aa13□□□□□ -0.33
CCM2-207ENST00000475551 PRRC2AP48634 2157 aaKnown RBP13□□□□□ -0.33
CCM2-207ENST00000475551 EDN2P20800 178 aa13□□□□□ -0.33
CCM2-207ENST00000475551 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
CCM2-207ENST00000475551 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
CCM2-207ENST00000475551 A8MZ25 164 aa12.98□□□□□ -0.33
CCM2-207ENST00000475551 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
CCM2-207ENST00000475551 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
CCM2-207ENST00000475551 MED13LQ71F56 2210 aa12.97□□□□□ -0.33
CCM2-207ENST00000475551 IGHV3OR16-10A0A075B7F0 116 aa12.97□□□□□ -0.33
CCM2-207ENST00000475551 FAM236AA0A1B0GUQ0 79 aa12.97□□□□□ -0.33
CCM2-207ENST00000475551 FAM236BA0A1B0GV22 79 aa12.97□□□□□ -0.33
CCM2-207ENST00000475551 IGLV1-40P01703 118 aa12.97□□□□□ -0.33
CCM2-207ENST00000475551 A0A1W2PPR1 153 aa12.96□□□□□ -0.33
CCM2-207ENST00000475551 IGKV3-20P01619 116 aa12.96□□□□□ -0.33
CCM2-207ENST00000475551 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
CCM2-207ENST00000475551 CITED2Q99967 270 aaPredicted RBP12.96□□□□□ -0.33
CCM2-207ENST00000475551 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
CCM2-207ENST00000475551 UBE2D4Q9Y2X8 147 aa12.95□□□□□ -0.34
CCM2-207ENST00000475551 NDUFA1O15239 70 aa12.95□□□□□ -0.34
CCM2-207ENST00000475551 SNRPD3P62318 126 aaKnown RBP12.95□□□□□ -0.34
CCM2-207ENST00000475551 LINC00643Q86TS7 51 aa12.95□□□□□ -0.34
CCM2-207ENST00000475551 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
CCM2-207ENST00000475551 HRNRQ86YZ3 2850 aaPredicted RBP12.94□□□□□ -0.34
CCM2-207ENST00000475551 CHCHD7Q9BUK0 85 aa12.94□□□□□ -0.34
CCM2-207ENST00000475551 UBTD1Q9HAC8 227 aa12.94□□□□□ -0.34
CCM2-207ENST00000475551 COX7A2LO14548 114 aa12.94□□□□□ -0.34
CCM2-207ENST00000475551 LRRK2Q5S007 2527 aa12.93□□□□□ -0.34
CCM2-207ENST00000475551 LY6EQ16553 131 aa12.93□□□□□ -0.34
CCM2-207ENST00000475551 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
CCM2-207ENST00000475551 CIRBPQ14011 172 aaKnown RBP12.93□□□□□ -0.34
CCM2-207ENST00000475551 SDIM1Q6ZPB5 146 aa12.93□□□□□ -0.34
CCM2-207ENST00000475551 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
CCM2-207ENST00000475551 A6NDX4 124 aa12.92□□□□□ -0.34
CCM2-207ENST00000475551 K7EQG2 157 aa12.92□□□□□ -0.34
CCM2-207ENST00000475551 DAND5Q8N907 189 aa12.92□□□□□ -0.34
CCM2-207ENST00000475551 SMCR5Q8TEV8 140 aa12.92□□□□□ -0.34
CCM2-207ENST00000475551 ATP5G1P05496 136 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 C3orf22Q8N5N4 141 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 C3orf56Q8N813 242 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 SPTAN1Q13813 2472 aaKnown RBP12.91□□□□□ -0.34
CCM2-207ENST00000475551 IGLV5-45A0A087WSX0 123 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 PROK1P58294 105 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 TIRAPP58753 221 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 BLCAPP62952 87 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 LINC00308Q8TCZ7 52 aa12.91□□□□□ -0.34
CCM2-207ENST00000475551 IGHV3-73A0A0B4J1V6 119 aa12.9□□□□□ -0.34
CCM2-207ENST00000475551 CFHR3Q02985 330 aa12.9□□□□□ -0.34
CCM2-207ENST00000475551 HELZ2Q9BYK8 2649 aaKnown RBP12.9□□□□□ -0.34
CCM2-207ENST00000475551 UQCRQO14949 82 aa12.89□□□□□ -0.35
CCM2-207ENST00000475551 CDKN2A-AS1Q9UH64 79 aa12.89□□□□□ -0.35
CCM2-207ENST00000475551 CRYBG3Q68DQ2 2970 aa12.89□□□□□ -0.35
CCM2-207ENST00000475551 GCN1Q92616 2671 aaKnown RBP12.89□□□□□ -0.35
CCM2-207ENST00000475551 H3BUX3 64 aa12.88□□□□□ -0.35
CCM2-207ENST00000475551 TRACP01848 142 aa12.88□□□□□ -0.35
CCM2-207ENST00000475551 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
CCM2-207ENST00000475551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.88□□□□□ -0.35
CCM2-207ENST00000475551 IGKV2-29A2NJV5 120 aaPredicted RBP12.88□□□□□ -0.35
CCM2-207ENST00000475551 CXCL5P42830 114 aa12.88□□□□□ -0.35
CCM2-207ENST00000475551 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
CCM2-207ENST00000475551 COPS9Q8WXC6 57 aa12.88□□□□□ -0.35
CCM2-207ENST00000475551 NDUFA7O95182 113 aa12.87□□□□□ -0.35
CCM2-207ENST00000475551 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
CCM2-207ENST00000475551 DAZ4Q86SG3 579 aaKnown RBP12.87□□□□□ -0.35
CCM2-207ENST00000475551 PPDPFQ9H3Y8 114 aa12.87□□□□□ -0.35
CCM2-207ENST00000475551 DAZ3Q9NR90 486 aaKnown RBP12.87□□□□□ -0.35
CCM2-207ENST00000475551 LINC00526Q96FQ7 95 aa12.87□□□□□ -0.35
CCM2-207ENST00000475551 LINC00467Q9BRT7 94 aa12.87□□□□□ -0.35
CCM2-207ENST00000475551 PEMTQ9UBM1 199 aa12.87□□□□□ -0.35
CCM2-207ENST00000475551 HIST2H2BCQ6DN03 193 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms