RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.48□□□□□ -1.05
KCNIP3-206ENST00000475491 RNF185Q96GF1 192 aa8.48□□□□□ -1.05
KCNIP3-206ENST00000475491 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 OVOL1O14753 267 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 HILS1P60008 231 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 TRAV25A0A0B4J276 109 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 TRAV21A0A0B4J279 112 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 A0A096LNJ9 63 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 IGKCP01834 107 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 C15orf53Q8NAA6 179 aa8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
KCNIP3-206ENST00000475491 RHODO00212 210 aa8.46□□□□□ -1.05
KCNIP3-206ENST00000475491 A0A087WX48 190 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 TRAV8-4A0A0B4J246 113 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 LINC00694P0DN24 101 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 EDA2RQ9HAV5 297 aa8.46□□□□□ -1.06
KCNIP3-206ENST00000475491 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 IGHV3-16A0A0C4DH30 117 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 TRBV6-1A0A0K0K1D8 114 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 C9JAW5 83 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 K7EQG2 157 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 IGHV3-53P01767 116 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 RNASE1P07998 156 aaKnown RBP8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 CHCHD5Q9BSY4 110 aa8.45□□□□□ -1.06
KCNIP3-206ENST00000475491 DEFB114Q30KQ6 69 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 PEMTQ9UBM1 199 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 TRAV2A0A0B4J234 112 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 DPM2O94777 84 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 NHLRC4P0CG21 123 aaPredicted RBP8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 ZNF56Q15929 161 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 ANKRD29Q8N6D5 301 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
KCNIP3-206ENST00000475491 LINC01587Q99440 93 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 A0A0J9YX75 114 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBMY1A1P0DJD3 496 aaKnown RBP8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBMY1CP0DJD4 496 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 FHL3Q13643 280 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBMY1FQ15415 496 aaKnown RBP8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 ZNF493Q6ZR52 646 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 Q8N1Y9 231 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBAKDNA6NC62 111 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBMY1BA6NDE4 496 aaKnown RBP8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBMY1EA6NEQ0 496 aaKnown RBP8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 RBMY1DP0C7P1 496 aaKnown RBP8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 CFAP126Q5VTH2 177 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 ZFP2Q6ZN57 461 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 HIGD1BQ9P298 99 aa8.43□□□□□ -1.06
KCNIP3-206ENST00000475491 J3KT08 172 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 K7EMT4 169 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 DEFB4AO15263 64 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 PROK1P58294 105 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 F5H768 121 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 MAP6D1Q9H9H5 199 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 MYOZ3Q8TDC0 251 aa8.42□□□□□ -1.06
KCNIP3-206ENST00000475491 Q8N2B8 174 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 P0DMU3 169 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 FAM231AP0DMU4 169 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 FAM231CP0DMU5 169 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 STHQ8IWL8 128 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 NTN5Q8WTR8 489 aaPredicted RBP8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 Q9UF83 564 aa8.41□□□□□ -1.06
KCNIP3-206ENST00000475491 CRLF1O75462 422 aa8.4□□□□□ -1.06
KCNIP3-206ENST00000475491 DNAJC30Q96LL9 226 aa8.4□□□□□ -1.06
KCNIP3-206ENST00000475491 KLK9Q2XQG4 91 aa8.4□□□□□ -1.06
KCNIP3-206ENST00000475491 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
KCNIP3-206ENST00000475491 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
KCNIP3-206ENST00000475491 PRO0461Q9UI25 63 aa8.4□□□□□ -1.06
KCNIP3-206ENST00000475491 SLC25A20O43772 301 aa8.4□□□□□ -1.07
KCNIP3-206ENST00000475491 PHLDA1Q8WV24 401 aaPredicted RBP8.4□□□□□ -1.07
KCNIP3-206ENST00000475491 CARD19Q96LW7 228 aa8.4□□□□□ -1.07
KCNIP3-206ENST00000475491 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 HERVK_113P61574 105 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 PMVKQ15126 192 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 TMEM86BQ8N661 226 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
KCNIP3-206ENST00000475491 H3BMM0 161 aa8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 RASL10AQ92737 203 aa8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 OPRPNQ99935 248 aaPredicted RBP8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 LAGE3Q14657 143 aa8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 SCGB3A1Q96QR1 104 aa8.38□□□□□ -1.07
KCNIP3-206ENST00000475491 DPH3P1Q9H4G8 78 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms