RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 LRCOL1A6NCL2 159 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 SMKR1H3BMG3 65 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 EREGO14944 169 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 RPS10P46783 165 aaKnown RBP10.81□□□□□ -0.68
SRM-204ENST00000475189 RBX1P62877 108 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 FAM104BQ5XKR9 115 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 UBE2WQ96B02 151 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 TM2D2Q9BX73 214 aa10.81□□□□□ -0.68
SRM-204ENST00000475189 NCR2O95944 276 aa10.8□□□□□ -0.68
SRM-204ENST00000475189 ANGP03950 147 aaKnown RBP10.8□□□□□ -0.68
SRM-204ENST00000475189 AMTP48728 403 aa10.8□□□□□ -0.68
SRM-204ENST00000475189 HBBP68871 147 aa10.8□□□□□ -0.68
SRM-204ENST00000475189 MRPL51Q4U2R6 128 aaKnown RBP10.8□□□□□ -0.68
SRM-204ENST00000475189 ENHOQ6UWT2 76 aa10.8□□□□□ -0.68
SRM-204ENST00000475189 ST20Q9HBF5 79 aa10.8□□□□□ -0.68
SRM-204ENST00000475189 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
SRM-204ENST00000475189 S100A8P05109 93 aa10.79□□□□□ -0.68
SRM-204ENST00000475189 POLR2KP53803 58 aaKnown RBP10.79□□□□□ -0.68
SRM-204ENST00000475189 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
SRM-204ENST00000475189 SEC11CQ9BY50 192 aa10.79□□□□□ -0.68
SRM-204ENST00000475189 KIAA1109Q2LD37 5005 aa10.79□□□□□ -0.68
SRM-204ENST00000475189 LRP1BQ9NZR2 4599 aa10.79□□□□□ -0.68
SRM-204ENST00000475189 I3L3M4 83 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 PMCHP20382 165 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 Q0VG73 95 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 ATP5L2Q7Z4Y8 100 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 NRACQ8N912 160 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 RMI2Q96E14 147 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 COX11Q9Y6N1 276 aa10.78□□□□□ -0.68
SRM-204ENST00000475189 IGKV2D-24A0A075B6R9 120 aa10.77□□□□□ -0.69
SRM-204ENST00000475189 A0A1B0GUV1 79 aa10.77□□□□□ -0.69
SRM-204ENST00000475189 MAPKAPK5-AS1Q8N8E1 139 aa10.77□□□□□ -0.69
SRM-204ENST00000475189 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 UBE2L6O14933 153 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 PPP1R17O96001 155 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 TSHBP01222 138 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 CRPP02741 224 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 APCSP02743 223 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 FUSP35637 526 aaKnown RBP eCLIP10.76□□□□□ -0.69
SRM-204ENST00000475189 C10orf91Q5T1B1 145 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 PRR34Q9NV39 138 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
SRM-204ENST00000475189 CKS2P33552 79 aa10.75□□□□□ -0.69
SRM-204ENST00000475189 WFDC2Q14508 124 aa10.75□□□□□ -0.69
SRM-204ENST00000475189 LINC00269Q8N2A0 174 aa10.75□□□□□ -0.69
SRM-204ENST00000475189 TMEM242Q9NWH2 141 aa10.75□□□□□ -0.69
SRM-204ENST00000475189 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.74□□□□□ -0.69
SRM-204ENST00000475189 IGKV2-29A2NJV5 120 aaPredicted RBP10.74□□□□□ -0.69
SRM-204ENST00000475189 SUMO2P61956 95 aaKnown RBP10.74□□□□□ -0.69
SRM-204ENST00000475189 MIAQ16674 131 aa10.74□□□□□ -0.69
SRM-204ENST00000475189 CLPSL2Q6UWE3 100 aa10.74□□□□□ -0.69
SRM-204ENST00000475189 C1orf43Q9BWL3 253 aa10.74□□□□□ -0.69
SRM-204ENST00000475189 CTDSP1Q9GZU7 261 aa10.74□□□□□ -0.69
SRM-204ENST00000475189 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 D6R8Y8 96 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 H7C423 109 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 VCYO14598 125 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 ESDP10768 282 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 Q8N814 137 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 BAALCQ8WXS3 180 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 BTF3L4Q96K17 158 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 IMMP2LQ96T52 175 aa10.73□□□□□ -0.69
SRM-204ENST00000475189 RYR1P21817 5038 aa10.72□□□□□ -0.69
SRM-204ENST00000475189 LECT2O14960 151 aa10.72□□□□□ -0.69
SRM-204ENST00000475189 REG3AQ06141 175 aa10.72□□□□□ -0.69
SRM-204ENST00000475189 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
SRM-204ENST00000475189 CARHSP1Q9Y2V2 147 aaKnown RBP10.72□□□□□ -0.69
SRM-204ENST00000475189 TNFRSF6BO95407 300 aa10.71□□□□□ -0.69
SRM-204ENST00000475189 FGF6P10767 208 aa10.71□□□□□ -0.69
SRM-204ENST00000475189 NPYP01303 97 aa10.7□□□□□ -0.7
SRM-204ENST00000475189 PPBPP02775 128 aa10.7□□□□□ -0.7
SRM-204ENST00000475189 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
SRM-204ENST00000475189 AMMECR1LQ6DCA0 310 aa10.7□□□□□ -0.7
SRM-204ENST00000475189 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
SRM-204ENST00000475189 KRTAP26-1Q6PEX3 210 aa10.7□□□□□ -0.7
SRM-204ENST00000475189 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
SRM-204ENST00000475189 PHOX2AO14813 284 aa10.69□□□□□ -0.7
SRM-204ENST00000475189 FCER1GP30273 86 aa10.69□□□□□ -0.7
SRM-204ENST00000475189 TMEM136Q6ZRR5 245 aa10.69□□□□□ -0.7
SRM-204ENST00000475189 ORMDL3Q8N138 153 aa10.69□□□□□ -0.7
SRM-204ENST00000475189 NTN5Q8WTR8 489 aaPredicted RBP10.69□□□□□ -0.7
SRM-204ENST00000475189 KIR2DL4Q99706 377 aa10.69□□□□□ -0.7
SRM-204ENST00000475189 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
SRM-204ENST00000475189 PRELID3AQ96N28 172 aa10.68□□□□□ -0.7
SRM-204ENST00000475189 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
SRM-204ENST00000475189 PCLOQ9Y6V0 5065 aa10.67□□□□□ -0.7
SRM-204ENST00000475189 IGLV10-54A0A075B6I4 117 aa10.67□□□□□ -0.7
SRM-204ENST00000475189 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
SRM-204ENST00000475189 IGLV5-52A0A0A0MRZ9 124 aa10.67□□□□□ -0.7
SRM-204ENST00000475189 TRAV8-4A0A0B4J246 113 aa10.67□□□□□ -0.7
SRM-204ENST00000475189 ZNF25P17030 456 aaPredicted RBP10.67□□□□□ -0.7
SRM-204ENST00000475189 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
SRM-204ENST00000475189 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
SRM-204ENST00000475189 KRTAP10-1P60331 282 aa10.66□□□□□ -0.7
SRM-204ENST00000475189 RHEBQ15382 184 aa10.66□□□□□ -0.7
SRM-204ENST00000475189 MRPL52Q86TS9 123 aaKnown RBP10.66□□□□□ -0.7
SRM-204ENST00000475189 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms