RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 Q6ZUT4 128 aa3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 SMIM20Q8N5G0 67 aa3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 ZFAND2AQ8N6M9 145 aa3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 C14orf178Q8N769 122 aaPredicted RBP3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 MAPKAPK5-AS1Q8N8E1 139 aa3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 ZMAT4Q9H898 229 aa3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 ERG28Q9UKR5 140 aa3.07□□□□□ -1.92
GAPVD1-216ENST00000474637 TRAV21A0A0B4J279 112 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 LOC107984156A0A0G2JMH3 177 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 SOCS3O14543 225 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 IGKCP01834 107 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 APOC4P55056 127 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 GAGE5Q13069 117 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 GAGE6Q13070 117 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 ODF3L2Q3SX64 289 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 ARL17AQ8IVW1 177 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 MAP6D1Q9H9H5 199 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 PRO0461Q9UI25 63 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 LENEPQ9Y5L5 61 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 NOTCH1P46531 2555 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 SORL1Q92673 2214 aa3.06□□□□□ -1.92
GAPVD1-216ENST00000474637 PSMB2P49721 201 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 OR11H2Q8NH07 326 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 KIR2DL5BQ8NHK3 375 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 DCANP1Q8TF63 244 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 TM2D2Q9BX73 214 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 C1QTNF4Q9BXJ3 329 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 MRPL35Q9NZE8 188 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 PHLDA3Q9Y5J5 127 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 TRBV7-9A0A0J9YWB2 115 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 ATP5LO75964 103 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 ASIPP42127 132 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 DEFB131AP59861 70 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 ZFP2Q6ZN57 461 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 SBSPONQ8IVN8 264 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 DEFB104AQ8WTQ1 72 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 RASL10AQ92737 203 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 RPL39LQ96EH5 51 aaKnown RBP3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 KIR2DL4Q99706 377 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 TM2D3Q9BRN9 247 aa3.05□□□□□ -1.92
GAPVD1-216ENST00000474637 RBMY1BA6NDE4 496 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 RBMY1EA6NEQ0 496 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 DPM2O94777 84 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 MGPP08493 103 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 RBMY1DP0C7P1 496 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 RNASE3P12724 160 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 SUMO2P61956 95 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 RRN3P1Q2M238 152 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 ZFAND6Q6FIF0 208 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 MORN3Q6PF18 240 aaPredicted RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 STHQ8IWL8 128 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 FAM19A4Q96LR4 140 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 WFDC10AQ9H1F0 79 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 DPH3P1Q9H4G8 78 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 HIGD1BQ9P298 99 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 A0A087WX48 190 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 GHRHP01286 108 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 ZNF688P0C7X2 276 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 RPL32P62910 135 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 PSMG4Q5JS54 123 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 CFAP126Q5VTH2 177 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 APRG1Q8IVJ8 170 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 SCGB3A1Q96QR1 104 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 JPT2Q9H910 190 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 TP53TG1Q9Y2A0 90 aa3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 PRKDCP78527 4128 aaKnown RBP3.04□□□□□ -1.92
GAPVD1-216ENST00000474637 TRAV12-3A0A0B4J271 114 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 LINC01549A6NIU2 74 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 DUSP14O95147 198 aaKnown RBP3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 IGKV3-20P01619 116 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 ORMDL2Q53FV1 153 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 FAM159AQ6UWV7 190 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 TRPT1Q86TN4 253 aaKnown RBP3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 TRAV12-2A0A075B6T6 113 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 A0A087WWL8 130 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 H7C1H1 209 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 HLA-DRB4P13762 266 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 RPL35AP18077 110 aaKnown RBP3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 LINC00315P59091 139 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 TOMM6Q96B49 74 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 HLA-DRB4X5D2U9 266 aa3.03□□□□□ -1.92
GAPVD1-216ENST00000474637 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.93
GAPVD1-216ENST00000474637 KNCNA6PVL3 124 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 KLLNB2CW77 178 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 F5H697 171 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 H3BMM0 161 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 SRSF9Q13242 221 aaKnown RBP eCLIP3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 TTC32Q5I0X7 151 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 NEXN-AS1Q8NBZ9 246 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 KIF25-AS1Q9Y6Z4 181 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 TRAV12-1A0A0B4J245 112 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 TRAV4A0A0B4J268 109 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 A0A0J9YX75 114 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE12JA6NER3 117 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 F8VRH5 84 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms