RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 FSHBP01225 129 aa2.37□□□□□ -2.03
UBR3-208ENST00000474426 FREM1Q5H8C1 2179 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 IGHV3-30-3P0DP02 117 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 TMEM254Q8TBM7 123 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 TNRC18O15417 2968 aaPredicted RBP2.36□□□□□ -2.03
UBR3-208ENST00000474426 MALRD1Q5VYJ5 2156 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 TRBV6-8A0A0A6YYG3 113 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 IGHV7-81A0A0B4J1V7 117 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 IGHV3-35A0A0C4DH35 117 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 LOC101927531A0A1B0GV80 90 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 CPSF4LA6NMK7 179 aaKnown RBP2.36□□□□□ -2.03
UBR3-208ENST00000474426 SRRM5B3KS81 715 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 TRGV3P03979 118 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 LINC01547P58512 204 aaPredicted RBP2.36□□□□□ -2.03
UBR3-208ENST00000474426 DEFB132Q7Z7B7 95 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 LIMD2Q9BT23 127 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 ICOSQ9Y6W8 199 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 U3KQK5 164 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 TNRC6BQ9UPQ9 1833 aaKnown RBP2.36□□□□□ -2.03
UBR3-208ENST00000474426 A8MWP4 228 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 CLPSP04118 112 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 IGKV3-11P04433 115 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 FXYD7P58549 80 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 LYZL1Q6UWQ5 148 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 GOLGA2P5Q9HBQ8 144 aa2.36□□□□□ -2.03
UBR3-208ENST00000474426 SDK1Q7Z5N4 2213 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 CLPSL1A2RUU4 121 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 CYSRT1A8MQ03 144 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 RTL8CO15255 209 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 CRPP02741 224 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 ARL14EPLP0DKL9 152 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 PLNP26678 52 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 C10orf128Q5T292 105 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 ARTNQ5T4W7 220 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 LYPD2Q6UXB3 125 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 Q8N9P0 234 aaPredicted RBP2.35□□□□□ -2.03
UBR3-208ENST00000474426 TRAV10A0A0B4J240 114 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 WFDC9Q8NEX5 89 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 IMMP1LQ96LU5 166 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 OBSCN-AS1Q96MR7 158 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 IGLV3-16A0A075B6K0 115 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 COX7A1P24310 79 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 GFRA4Q9GZZ7 299 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 XAGE1AQ9HD64 81 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 ADAMTS20P59510 1910 aa2.35□□□□□ -2.03
UBR3-208ENST00000474426 CEP192Q8TEP8 1941 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 IGHV3-74A0A0B4J1X5 117 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 PIGBOS1A0A0B4J2F0 54 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 A6NED7 52 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 Q8NAQ8 132 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 ASPMQ8IZT6 3477 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 CXorf51AA0A1B0GTR3 108 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 H7C2G1 150 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 SOCS3O14543 225 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 IGLV3-25P01717 112 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 ZNF137PP52743 207 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 PRR4Q16378 134 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 Q6ZR54 194 aa2.34□□□□□ -2.03
UBR3-208ENST00000474426 C14orf178Q8N769 122 aaPredicted RBP2.34□□□□□ -2.03
UBR3-208ENST00000474426 HMGN4O00479 90 aa2.34□□□□□ -2.04
UBR3-208ENST00000474426 COX6CP09669 75 aa2.34□□□□□ -2.04
UBR3-208ENST00000474426 ENHOQ6UWT2 76 aa2.34□□□□□ -2.04
UBR3-208ENST00000474426 TRBV6-6A0A0A6YYG2 114 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 D6R8Y8 96 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 IGLV1-47P01700 117 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
UBR3-208ENST00000474426 MUSTN1Q8IVN3 82 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 MED12Q93074 2177 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 IGIPA6NJ69 53 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 I3L3M4 83 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 IGHV3-11P01762 117 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 Q1RN00 199 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 TMEM190Q8WZ59 177 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 DHRS4-AS1Q9P1J3 65 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.33□□□□□ -2.04
UBR3-208ENST00000474426 PMS2P5A8MQ11 134 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 TFF3Q07654 80 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 CSAG1Q6PB30 78 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 LYPD1Q8N2G4 141 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 AMELXQ99217 191 aa2.33□□□□□ -2.04
UBR3-208ENST00000474426 TRAV12-1A0A0B4J245 112 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 LECT2O14960 151 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 NDUFA3O95167 84 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 DNAL4O96015 105 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 IGHV1-69P01742 117 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 CASC2Q6XLA1 102 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 Q6ZQT0 140 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 A0A0J9YXY3 114 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 A0A1W2PNM2 257 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 MIAQ16674 131 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 HIGD2BQ4VC39 106 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 KLK15Q9H2R5 256 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 NDUFA4L2Q9NRX3 87 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 F8VRH5 84 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 CASC10Q5T4H9 136 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 KLHL30-AS1Q8NEE0 82 aa2.32□□□□□ -2.04
UBR3-208ENST00000474426 C1orf147Q96MC9 270 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms