RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SMKR1H3BMG3 65 aa12.57□□□□□ -0.4
CCDC171-206ENST00000474193 NCR2O95944 276 aa12.57□□□□□ -0.4
CCDC171-206ENST00000474193 KRTAP10-2P60368 255 aa12.57□□□□□ -0.4
CCDC171-206ENST00000474193 CDPF1Q6NVV7 123 aa12.57□□□□□ -0.4
CCDC171-206ENST00000474193 KIAA1109Q2LD37 5005 aa12.57□□□□□ -0.4
CCDC171-206ENST00000474193 D6R8Y8 96 aa12.56□□□□□ -0.4
CCDC171-206ENST00000474193 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
CCDC171-206ENST00000474193 ORMDL3Q8N138 153 aa12.56□□□□□ -0.4
CCDC171-206ENST00000474193 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
CCDC171-206ENST00000474193 A0A087WTM6 91 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 SDHAF1A6NFY7 115 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 APCSP02743 223 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 PMCHP20382 165 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 ELOBQ15370 118 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 Q9HAA7 133 aa12.55□□□□□ -0.4
CCDC171-206ENST00000474193 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
CCDC171-206ENST00000474193 MT-ND6P03923 174 aa12.54□□□□□ -0.4
CCDC171-206ENST00000474193 RPS10P46783 165 aaKnown RBP12.54□□□□□ -0.4
CCDC171-206ENST00000474193 COTL1Q14019 142 aa12.54□□□□□ -0.4
CCDC171-206ENST00000474193 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 I3L3M4 83 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 GAS8-AS1O95177 125 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 LAGE3Q14657 143 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 PRELID3AQ96N28 172 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 C20orf78Q9BR46 151 aa12.53□□□□□ -0.4
CCDC171-206ENST00000474193 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 TRAV8-3A0A0A6YYJ7 113 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 VCYO14598 125 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 PHOX2AO14813 284 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 TNFRSF6BO95407 300 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
CCDC171-206ENST00000474193 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 NRACQ8N912 160 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 LAMTOR2Q9Y2Q5 125 aa12.52□□□□□ -0.41
CCDC171-206ENST00000474193 IGHV1-24A0A0C4DH33 117 aa12.51□□□□□ -0.41
CCDC171-206ENST00000474193 PKIAP61925 76 aa12.51□□□□□ -0.41
CCDC171-206ENST00000474193 MAPKAPK5-AS1Q8N8E1 139 aa12.51□□□□□ -0.41
CCDC171-206ENST00000474193 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
CCDC171-206ENST00000474193 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
CCDC171-206ENST00000474193 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
CCDC171-206ENST00000474193 RMI2Q96E14 147 aa12.5□□□□□ -0.41
CCDC171-206ENST00000474193 KIR2DL4Q99706 377 aa12.5□□□□□ -0.41
CCDC171-206ENST00000474193 COX11Q9Y6N1 276 aa12.5□□□□□ -0.41
CCDC171-206ENST00000474193 A0A087WX48 190 aa12.49□□□□□ -0.41
CCDC171-206ENST00000474193 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
CCDC171-206ENST00000474193 S100A1P23297 94 aa12.49□□□□□ -0.41
CCDC171-206ENST00000474193 FCER1GP30273 86 aa12.49□□□□□ -0.41
CCDC171-206ENST00000474193 AMTP48728 403 aa12.49□□□□□ -0.41
CCDC171-206ENST00000474193 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
CCDC171-206ENST00000474193 MRPL18Q9H0U6 180 aaKnown RBP12.49□□□□□ -0.41
CCDC171-206ENST00000474193 TRAPPC1Q9Y5R8 145 aa12.49□□□□□ -0.41
CCDC171-206ENST00000474193 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 UBE2L6O14933 153 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 TCAPO15273 167 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 NPYP01303 97 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 IQCJQ1A5X6 159 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 DEFB104AQ8WTQ1 72 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 TMEM243Q9BU79 118 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 MAP1LC3AQ9H492 121 aa12.48□□□□□ -0.41
CCDC171-206ENST00000474193 KIAA1644Q3SXP7 199 aa12.47□□□□□ -0.41
CCDC171-206ENST00000474193 CHCHD7Q9BUK0 85 aa12.47□□□□□ -0.41
CCDC171-206ENST00000474193 RPL32P62910 135 aaKnown RBP12.46□□□□□ -0.41
CCDC171-206ENST00000474193 NTN5Q8WTR8 489 aaPredicted RBP12.46□□□□□ -0.41
CCDC171-206ENST00000474193 IGLV5-52A0A0A0MRZ9 124 aa12.45□□□□□ -0.42
CCDC171-206ENST00000474193 RAB5AP20339 215 aa12.45□□□□□ -0.42
CCDC171-206ENST00000474193 GCSHP23434 173 aa12.45□□□□□ -0.42
CCDC171-206ENST00000474193 NIT1Q86X76 327 aa12.45□□□□□ -0.42
CCDC171-206ENST00000474193 YPEL4Q96NS1 127 aa12.45□□□□□ -0.42
CCDC171-206ENST00000474193 SMIM2Q9BVW6 85 aa12.45□□□□□ -0.42
CCDC171-206ENST00000474193 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
CCDC171-206ENST00000474193 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
CCDC171-206ENST00000474193 GAGE6Q13070 117 aa12.44□□□□□ -0.42
CCDC171-206ENST00000474193 TSHBP01222 138 aa12.43□□□□□ -0.42
CCDC171-206ENST00000474193 FUSP35637 526 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC171-206ENST00000474193 Q8N1X5 172 aa12.43□□□□□ -0.42
CCDC171-206ENST00000474193 KRTAP17-1Q9BYP8 105 aa12.43□□□□□ -0.42
CCDC171-206ENST00000474193 KLK12Q9UKR0 248 aa12.43□□□□□ -0.42
CCDC171-206ENST00000474193 LRCOL1A6NCL2 159 aa12.42□□□□□ -0.42
CCDC171-206ENST00000474193 Q0VG73 95 aa12.42□□□□□ -0.42
CCDC171-206ENST00000474193 AMMECR1LQ6DCA0 310 aa12.42□□□□□ -0.42
CCDC171-206ENST00000474193 Q8N814 137 aa12.42□□□□□ -0.42
CCDC171-206ENST00000474193 LRP1BQ9NZR2 4599 aa12.42□□□□□ -0.42
CCDC171-206ENST00000474193 PRSS47A8MTI9 375 aa12.41□□□□□ -0.42
CCDC171-206ENST00000474193 H7C423 109 aa12.41□□□□□ -0.42
CCDC171-206ENST00000474193 SCO1O75880 301 aa12.41□□□□□ -0.42
CCDC171-206ENST00000474193 SMAGPQ0VAQ4 97 aa12.41□□□□□ -0.42
CCDC171-206ENST00000474193 Q8N3U1 123 aa12.41□□□□□ -0.42
CCDC171-206ENST00000474193 TMEM18Q96B42 140 aa12.41□□□□□ -0.42
CCDC171-206ENST00000474193 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-206ENST00000474193 NXT2Q9NPJ8 142 aaKnown RBP12.41□□□□□ -0.42
CCDC171-206ENST00000474193 IGKV2D-24A0A075B6R9 120 aa12.4□□□□□ -0.42
CCDC171-206ENST00000474193 Q8N8P6 123 aa12.4□□□□□ -0.42
CCDC171-206ENST00000474193 PRSS3P2Q8NHM4 247 aa12.4□□□□□ -0.42
CCDC171-206ENST00000474193 UBE2WQ96B02 151 aa12.4□□□□□ -0.42
CCDC171-206ENST00000474193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms