RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TRAV12-1A0A0B4J245 112 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 K7EQD1 137 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 ANK2Q01484 3957 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 LOC100131303A0A0U1RQF7 123 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
VARS2-206ENST00000473916 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
VARS2-206ENST00000473916 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
VARS2-206ENST00000473916 IGKV2D-26A0A0A0MRZ7 120 aa12.78□□□□□ -0.36
VARS2-206ENST00000473916 APOC4P55056 127 aa12.78□□□□□ -0.36
VARS2-206ENST00000473916 CEMP1Q6PRD7 247 aaPredicted RBP12.78□□□□□ -0.36
VARS2-206ENST00000473916 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
VARS2-206ENST00000473916 CHCHD7Q9BUK0 85 aa12.78□□□□□ -0.36
VARS2-206ENST00000473916 F8VRH5 84 aa12.78□□□□□ -0.36
VARS2-206ENST00000473916 TIMM17AQ99595 171 aa12.78□□□□□ -0.36
VARS2-206ENST00000473916 G0S2P27469 103 aa12.77□□□□□ -0.37
VARS2-206ENST00000473916 OR11H2Q8NH07 326 aa12.77□□□□□ -0.37
VARS2-206ENST00000473916 TRBV7-3A0A075B6L6 115 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
VARS2-206ENST00000473916 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
VARS2-206ENST00000473916 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 FGF6P10767 208 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 GAGE1Q13065 139 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 GAGE4Q13068 117 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 GAGE5Q13069 117 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 SLC25A34Q6PIV7 304 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 TTTY13Q9BZ97 58 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 COX8AP10176 69 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 NMUP48645 174 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 PCP2Q8IVA1 136 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 FAM104AQ969W3 186 aa12.76□□□□□ -0.37
VARS2-206ENST00000473916 FHL2Q14192 279 aa12.75□□□□□ -0.37
VARS2-206ENST00000473916 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
VARS2-206ENST00000473916 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
VARS2-206ENST00000473916 IGLV4-69A0A075B6H9 119 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 SMIM9A6NGZ8 99 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 IGHV4-28A0A0C4DH34 117 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 PLNP26678 52 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 COTL1Q14019 142 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 PMVKQ15126 192 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 LINC00612Q8N6U2 182 aa12.74□□□□□ -0.37
VARS2-206ENST00000473916 IGLV4-3A0A075B6K6 122 aa12.73□□□□□ -0.37
VARS2-206ENST00000473916 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
VARS2-206ENST00000473916 G3V4G9 280 aa12.73□□□□□ -0.37
VARS2-206ENST00000473916 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
VARS2-206ENST00000473916 BATFQ16520 125 aa12.73□□□□□ -0.37
VARS2-206ENST00000473916 RNASE13Q5GAN3 156 aaKnown RBP12.73□□□□□ -0.37
VARS2-206ENST00000473916 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
VARS2-206ENST00000473916 NOTCH1P46531 2555 aa12.73□□□□□ -0.37
VARS2-206ENST00000473916 LINC01549A6NIU2 74 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 UBE2D3P61077 147 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 UBE2D2P62837 147 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 EGFEM1PQ0D2K5 195 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 DNAH3Q8TD57 4116 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 M0R143 59 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
VARS2-206ENST00000473916 C11orf86A6NJI1 115 aa12.71□□□□□ -0.37
VARS2-206ENST00000473916 C2orf91Q6ZV80 131 aa12.71□□□□□ -0.37
VARS2-206ENST00000473916 Q8NAQ8 132 aa12.71□□□□□ -0.37
VARS2-206ENST00000473916 CELA1Q9UNI1 258 aa12.71□□□□□ -0.38
VARS2-206ENST00000473916 MRPS16Q9Y3D3 137 aaKnown RBP12.71□□□□□ -0.38
VARS2-206ENST00000473916 TRBV6-4A0A1B0GX49 114 aa12.7□□□□□ -0.38
VARS2-206ENST00000473916 UBE2D4Q9Y2X8 147 aa12.7□□□□□ -0.38
VARS2-206ENST00000473916 BOD1L2Q8IYS8 172 aa12.69□□□□□ -0.38
VARS2-206ENST00000473916 RNF183Q96D59 192 aa12.69□□□□□ -0.38
VARS2-206ENST00000473916 RETNQ9HD89 108 aa12.69□□□□□ -0.38
VARS2-206ENST00000473916 LINC00694P0DN24 101 aa12.69□□□□□ -0.38
VARS2-206ENST00000473916 HINT1P49773 126 aaPredicted RBP12.69□□□□□ -0.38
VARS2-206ENST00000473916 PYGO1Q9Y3Y4 419 aa12.68□□□□□ -0.38
VARS2-206ENST00000473916 Q6ZUT4 128 aa12.67□□□□□ -0.38
VARS2-206ENST00000473916 DAZ4Q86SG3 579 aaKnown RBP12.67□□□□□ -0.38
VARS2-206ENST00000473916 DAZ3Q9NR90 486 aaKnown RBP12.67□□□□□ -0.38
VARS2-206ENST00000473916 CIDEAO60543 219 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 MAPKAPK5-AS1Q8N8E1 139 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 C2orf88Q9BSF0 95 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 VCX2Q9H322 139 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 LYRM9A8MSI8 78 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 MIFP14174 115 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 MPV17L2Q567V2 206 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 AMELXQ99217 191 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 NBEAL1Q6ZS30 2694 aa12.66□□□□□ -0.38
VARS2-206ENST00000473916 TENM3Q9P273 2699 aa12.65□□□□□ -0.38
VARS2-206ENST00000473916 A0A0J9YXV3 536 aa12.65□□□□□ -0.38
VARS2-206ENST00000473916 PRB2P02812 416 aaPredicted RBP12.64□□□□□ -0.39
VARS2-206ENST00000473916 PRADC1Q9BSG0 188 aa12.64□□□□□ -0.39
VARS2-206ENST00000473916 CHAC1Q9BUX1 264 aa12.64□□□□□ -0.39
VARS2-206ENST00000473916 SPANXA1Q9NS26 97 aa12.64□□□□□ -0.39
VARS2-206ENST00000473916 A0A1B0GV90 55 aa12.64□□□□□ -0.39
VARS2-206ENST00000473916 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
VARS2-206ENST00000473916 SBSPONQ8IVN8 264 aa12.64□□□□□ -0.39
VARS2-206ENST00000473916 CRYBA4P53673 196 aa12.63□□□□□ -0.39
VARS2-206ENST00000473916 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
VARS2-206ENST00000473916 GYPEP15421 78 aa12.62□□□□□ -0.39
VARS2-206ENST00000473916 DLEU1O43261 78 aa12.62□□□□□ -0.39
VARS2-206ENST00000473916 DAD1P61803 113 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms