RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 BPESC1Q9GZL8 116 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 CNTRLQ7Z7A1 2325 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 ASCC3Q8N3C0 2202 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 LYRM9A8MSI8 78 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 M0R1B8 84 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 RNASE4P34096 147 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 RMI2Q96E14 147 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 BRWD1Q9NSI6 2320 aa3.7□□□□□ -1.82
TMEM39A-206ENST00000473684 SVILO95425 2214 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 INAFM1C9JVW0 142 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 ERC2-IT1O76042 136 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 MGPP08493 103 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 MIFP14174 115 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 MAGEA5P43359 124 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 MRGPRG-AS1Q2M3A8 158 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 C6orf223Q8N319 242 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 ZNRF1Q8ND25 227 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 LY6G5BQ8NDX9 201 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 FREM1Q5H8C1 2179 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 PI4KAP42356 2102 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 ARFGEF3Q5TH69 2177 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 TRBV6-5A0A0K0K1A5 114 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 PRB4P10163 310 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 Q1T7F1 81 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 MRPL53Q96EL3 112 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 HES7Q9BYE0 225 aa3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 SPTBN5Q9NRC6 3674 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-206ENST00000473684 A0A0J9YXV3 536 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 ENHOQ6UWT2 76 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 KRTAP1-3Q8IUG1 177 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 LINC00308Q8TCZ7 52 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 LENEPQ9Y5L5 61 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 SNURFQ9Y675 71 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 BUB1B-PAK6H3BSN5 160 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 HOXD3P31249 432 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 Q0VFX4 171 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 SOSTDC1Q6X4U4 206 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 UBE2E2Q96LR5 201 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 C11orf68Q9H3H3 251 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 PHLDA3Q9Y5J5 127 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 ZGRF1Q86YA3 2104 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 POLEQ07864 2286 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 H0YGX0 51 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 K7EIM0 57 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 NDUFA1O15239 70 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 APOC4P55056 127 aa3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 RPL36ALQ969Q0 106 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-206ENST00000473684 E7EQL1 145 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 NDUFS5O43920 106 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 C15orf32Q32M92 178 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 Q6ZS52 159 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 PRR26Q8N8Z3 221 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 ZNF580Q9UK33 172 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 DNAH12Q6ZR08 3092 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 TRBV7-4A0A0J9YYF1 115 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 JMJD7-PLA2G4BH0Y9G9 81 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 S100A4P26447 101 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 CD164L2Q6UWJ8 174 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 C9orf47Q6ZRZ4 202 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 C11orf45Q8TAV5 145 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 OPRPNQ99935 248 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 Q9HAA7 133 aa3.67□□□□□ -1.82
TMEM39A-206ENST00000473684 DOCK10Q96BY6 2186 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 F6UB75 175 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 IGHV4-30-4P0DP06 118 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 CD28P10747 220 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 Q75L30 129 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 C20orf203Q8NBC4 194 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 PRAC2D3DTV9 90 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 IGF1P05019 195 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 UBE2BP63146 152 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 ZNF625Q96I27 306 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 RPP25Q9BUL9 199 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 ZNRD1Q9P1U0 126 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 SMAD5-AS1Q9Y6J3 95 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 KIF25-AS1Q9Y6Z4 181 aa3.66□□□□□ -1.82
TMEM39A-206ENST00000473684 TRAV21A0A0B4J279 112 aa3.65□□□□□ -1.82
TMEM39A-206ENST00000473684 LINC00315P59091 139 aa3.65□□□□□ -1.82
TMEM39A-206ENST00000473684 NDPQ00604 133 aa3.65□□□□□ -1.82
TMEM39A-206ENST00000473684 WFDC9Q8NEX5 89 aa3.65□□□□□ -1.82
TMEM39A-206ENST00000473684 DEFB127Q9H1M4 99 aa3.65□□□□□ -1.82
TMEM39A-206ENST00000473684 PLA2G2AP14555 144 aa3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 FUSP35637 526 aaKnown RBP eCLIP3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 Q6ZVQ6 151 aa3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 M0R378 163 aa3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 CTSGP08311 255 aa3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 LINC00588Q9Y4M8 146 aa3.65□□□□□ -1.83
TMEM39A-206ENST00000473684 IGLV5-52A0A0A0MRZ9 124 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 APELAP0DMC3 54 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 GAFA1Q96PS6 74 aa3.64□□□□□ -1.83
TMEM39A-206ENST00000473684 ORMDL1Q9P0S3 153 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms