RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PMCHP20382 165 aa14.02□□□□□ -0.17
TOP3A-204ENST00000472959 POLR2KP53803 58 aaKnown RBP14.02□□□□□ -0.17
TOP3A-204ENST00000472959 AMTP48728 403 aa14.01□□□□□ -0.17
TOP3A-204ENST00000472959 C20orf78Q9BR46 151 aa14.01□□□□□ -0.17
TOP3A-204ENST00000472959 DNAH2Q9P225 4427 aa14□□□□□ -0.17
TOP3A-204ENST00000472959 TRBV24-1A0A075B6N3 115 aa14□□□□□ -0.17
TOP3A-204ENST00000472959 TRBV27A0A0K0K1C4 114 aa14□□□□□ -0.17
TOP3A-204ENST00000472959 VCYO14598 125 aa14□□□□□ -0.17
TOP3A-204ENST00000472959 SUMO2P61956 95 aaKnown RBP14□□□□□ -0.17
TOP3A-204ENST00000472959 D6R8Y8 96 aa13.99□□□□□ -0.17
TOP3A-204ENST00000472959 PHOX2AO14813 284 aa13.99□□□□□ -0.17
TOP3A-204ENST00000472959 GAGE6Q13070 117 aa13.99□□□□□ -0.17
TOP3A-204ENST00000472959 Q6ZRN7 208 aaPredicted RBP13.99□□□□□ -0.17
TOP3A-204ENST00000472959 SLC7A5P1Q8MH63 180 aa13.99□□□□□ -0.17
TOP3A-204ENST00000472959 ORMDL3Q8N138 153 aa13.99□□□□□ -0.17
TOP3A-204ENST00000472959 TRAV8-3A0A0A6YYJ7 113 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 APCSP02743 223 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 MPV17L2Q567V2 206 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 ATRAIDQ6UW56 229 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 TMEM136Q6ZRR5 245 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 DEFB104AQ8WTQ1 72 aa13.98□□□□□ -0.17
TOP3A-204ENST00000472959 UBE2L6O14933 153 aa13.97□□□□□ -0.17
TOP3A-204ENST00000472959 RPL32P62910 135 aaKnown RBP13.97□□□□□ -0.17
TOP3A-204ENST00000472959 KLK12Q9UKR0 248 aa13.97□□□□□ -0.17
TOP3A-204ENST00000472959 TSHBP01222 138 aa13.96□□□□□ -0.17
TOP3A-204ENST00000472959 RBX1P62877 108 aa13.96□□□□□ -0.17
TOP3A-204ENST00000472959 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 H7C423 109 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 TNP2Q05952 138 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 COX19Q49B96 90 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 PRELID3AQ96N28 172 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 KIR2DL4Q99706 377 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 Q9HAA7 133 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 LAMTOR2Q9Y2Q5 125 aa13.95□□□□□ -0.18
TOP3A-204ENST00000472959 EPPK1P58107 5090 aaKnown RBP13.95□□□□□ -0.18
TOP3A-204ENST00000472959 NPYP01303 97 aa13.94□□□□□ -0.18
TOP3A-204ENST00000472959 ANGP03950 147 aaKnown RBP13.94□□□□□ -0.18
TOP3A-204ENST00000472959 Q0VG73 95 aa13.94□□□□□ -0.18
TOP3A-204ENST00000472959 Q8N976 141 aa13.94□□□□□ -0.18
TOP3A-204ENST00000472959 TM2D2Q9BX73 214 aa13.94□□□□□ -0.18
TOP3A-204ENST00000472959 FRAS1Q86XX4 4008 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 TCAPO15273 167 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 HLA-DQA1P01909 254 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 FCER1GP30273 86 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 UBE2WQ96B02 151 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 RMI2Q96E14 147 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 GNB1LQ9BYB4 327 aa13.93□□□□□ -0.18
TOP3A-204ENST00000472959 BIRC6Q9NR09 4857 aa13.92□□□□□ -0.18
TOP3A-204ENST00000472959 ESDP10768 282 aa13.92□□□□□ -0.18
TOP3A-204ENST00000472959 SMIM2Q9BVW6 85 aa13.92□□□□□ -0.18
TOP3A-204ENST00000472959 COX11Q9Y6N1 276 aa13.92□□□□□ -0.18
TOP3A-204ENST00000472959 DNAH17Q9UFH2 4485 aa13.92□□□□□ -0.18
TOP3A-204ENST00000472959 A0A1B0GVY2 172 aa13.91□□□□□ -0.18
TOP3A-204ENST00000472959 FAT2Q9NYQ8 4349 aa13.9□□□□□ -0.18
TOP3A-204ENST00000472959 PSCAO43653 123 aa13.9□□□□□ -0.18
TOP3A-204ENST00000472959 CRPP02741 224 aa13.9□□□□□ -0.18
TOP3A-204ENST00000472959 AMMECR1LQ6DCA0 310 aa13.9□□□□□ -0.18
TOP3A-204ENST00000472959 PRR34Q9NV39 138 aa13.9□□□□□ -0.18
TOP3A-204ENST00000472959 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-204ENST00000472959 IGKV2-29A2NJV5 120 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-204ENST00000472959 PRSS47A8MTI9 375 aa13.89□□□□□ -0.19
TOP3A-204ENST00000472959 MT-ND6P03923 174 aa13.89□□□□□ -0.19
TOP3A-204ENST00000472959 ENHOQ6UWT2 76 aa13.89□□□□□ -0.19
TOP3A-204ENST00000472959 C20orf203Q8NBC4 194 aa13.89□□□□□ -0.19
TOP3A-204ENST00000472959 FGF6P10767 208 aa13.88□□□□□ -0.19
TOP3A-204ENST00000472959 ZNF25P17030 456 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-204ENST00000472959 MIAQ16674 131 aa13.88□□□□□ -0.19
TOP3A-204ENST00000472959 LINC00269Q8N2A0 174 aa13.88□□□□□ -0.19
TOP3A-204ENST00000472959 MAP1LC3AQ9H492 121 aa13.88□□□□□ -0.19
TOP3A-204ENST00000472959 IGLV4-60A0A075B6I1 120 aa13.87□□□□□ -0.19
TOP3A-204ENST00000472959 RNASEKQ6P5S7 137 aaKnown RBP13.87□□□□□ -0.19
TOP3A-204ENST00000472959 TGIF2-C20orf24A0A0A6YYL0 155 aa13.86□□□□□ -0.19
TOP3A-204ENST00000472959 EREGO14944 169 aa13.86□□□□□ -0.19
TOP3A-204ENST00000472959 SMAGPQ0VAQ4 97 aa13.86□□□□□ -0.19
TOP3A-204ENST00000472959 IGKV2D-24A0A075B6R9 120 aa13.85□□□□□ -0.19
TOP3A-204ENST00000472959 RAB5AP20339 215 aa13.85□□□□□ -0.19
TOP3A-204ENST00000472959 REG3AQ06141 175 aa13.85□□□□□ -0.19
TOP3A-204ENST00000472959 MRPL52Q86TS9 123 aaKnown RBP13.85□□□□□ -0.19
TOP3A-204ENST00000472959 TMEM18Q96B42 140 aa13.85□□□□□ -0.19
TOP3A-204ENST00000472959 TMEM101Q96IK0 257 aa13.85□□□□□ -0.19
TOP3A-204ENST00000472959 C1orf43Q9BWL3 253 aa13.85□□□□□ -0.19
TOP3A-204ENST00000472959 A0A087WTM6 91 aa13.84□□□□□ -0.19
TOP3A-204ENST00000472959 KIAA1644Q3SXP7 199 aa13.84□□□□□ -0.19
TOP3A-204ENST00000472959 SMCO4Q9NRQ5 59 aa13.84□□□□□ -0.19
TOP3A-204ENST00000472959 LOC389332A0A1B0GUA5 103 aa13.83□□□□□ -0.2
TOP3A-204ENST00000472959 CLPSL2Q6UWE3 100 aa13.83□□□□□ -0.2
TOP3A-204ENST00000472959 OR5A1Q8NGJ0 315 aa13.83□□□□□ -0.2
TOP3A-204ENST00000472959 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
TOP3A-204ENST00000472959 TRAV8-4A0A0B4J246 113 aa13.82□□□□□ -0.2
TOP3A-204ENST00000472959 FABP9Q0Z7S8 132 aa13.82□□□□□ -0.2
TOP3A-204ENST00000472959 Q8N8P6 123 aa13.82□□□□□ -0.2
TOP3A-204ENST00000472959 CSDC2Q9Y534 153 aaKnown RBP13.82□□□□□ -0.2
TOP3A-204ENST00000472959 LRCOL1A6NCL2 159 aa13.81□□□□□ -0.2
TOP3A-204ENST00000472959 K7EMI3 77 aa13.81□□□□□ -0.2
TOP3A-204ENST00000472959 YPEL4Q96NS1 127 aa13.81□□□□□ -0.2
TOP3A-204ENST00000472959 NXT2Q9NPJ8 142 aaKnown RBP13.81□□□□□ -0.2
TOP3A-204ENST00000472959 DGAT2L7PQ6IED9 249 aa13.8□□□□□ -0.2
TOP3A-204ENST00000472959 ALKBH7Q9BT30 221 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-204ENST00000472959 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms