RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 FLGP20930 4061 aaPredicted RBP-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 ARHGEF10O15013 1369 aa-0.59□□□□□ -2.5
COMMD3-211ENST00000472673 CNOT1A5YKK6 2376 aaKnown RBP-0.6□□□□□ -2.5
COMMD3-211ENST00000472673 SMIM6P0DI80 62 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 LINC00694P0DN24 101 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 RRAS2P62070 204 aaPredicted RBP-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 Q5VV11 94 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 Q6ZUT4 128 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 TAC4Q86UU9 113 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 BAGE3Q86Y29 109 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 PSMG3Q9BT73 122 aaPredicted RBP-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 LINC00312Q9Y6C7 94 aa-0.6□□□□□ -2.51
COMMD3-211ENST00000472673 MXRA5Q9NR99 2828 aa-0.61□□□□□ -2.51
COMMD3-211ENST00000472673 CREBBPQ92793 2442 aa-0.61□□□□□ -2.51
COMMD3-211ENST00000472673 IFNA17P01571 189 aa-0.61□□□□□ -2.51
COMMD3-211ENST00000472673 CTAGE3PQ8IX95 158 aa-0.61□□□□□ -2.51
COMMD3-211ENST00000472673 SPANXA1Q9NS26 97 aa-0.61□□□□□ -2.51
COMMD3-211ENST00000472673 FAT1Q14517 4588 aa-0.61□□□□□ -2.51
COMMD3-211ENST00000472673 EP300Q09472 2414 aaPredicted RBP-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 OVOS2A0A0J9YW53 1432 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 ZNF609O15014 1411 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 OVOS2Q6IE36 1432 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 SNCGO76070 127 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 CKS1BP61024 79 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 SPCS1Q9Y6A9 102 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 MYH8P13535 1937 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 LAMA5O15230 3695 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 KDM3BQ7LBC6 1761 aa-0.62□□□□□ -2.51
COMMD3-211ENST00000472673 PKHD1P08F94 4074 aa-0.63□□□□□ -2.51
COMMD3-211ENST00000472673 DISP2A7MBM2 1401 aa-0.63□□□□□ -2.51
COMMD3-211ENST00000472673 FXYD6-FXYD2A0A087WZ82 144 aa-0.63□□□□□ -2.51
COMMD3-211ENST00000472673 PIPP12273 146 aaPredicted RBP-0.63□□□□□ -2.51
COMMD3-211ENST00000472673 CBLN1P23435 193 aa-0.63□□□□□ -2.51
COMMD3-211ENST00000472673 ZNF818PQ6ZRF7 136 aa-0.63□□□□□ -2.51
COMMD3-211ENST00000472673 C10orf71Q711Q0 1435 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 LAMC1P11047 1609 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 SETD2Q9BYW2 2564 aaPredicted RBP-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 URB1O60287 2271 aaKnown RBP-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 ADGRB1O14514 1584 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 J3QR89 54 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 K7ERU9 68 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 M0R2Z0 102 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 PPP1R17O96001 155 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 CCL18P55774 89 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 B2MP61769 119 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 SPTSSAQ969W0 71 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 SEC11CQ9BY50 192 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 AGPAT4-IT1Q9H0P7 198 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 TSC2P49815 1807 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 DAPK1P53355 1430 aa-0.64□□□□□ -2.51
COMMD3-211ENST00000472673 TMEM2Q9UHN6 1383 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 TSPAN19P0C672 248 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 SCGB1A1P11684 91 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 KRTAP19-8Q3LI54 63 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 TP53AIP1Q9HCN2 124 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 LRP6O75581 1613 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 CASKIN1Q8WXD9 1431 aa-0.65□□□□□ -2.51
COMMD3-211ENST00000472673 ERCC6L2Q5T890 1561 aa-0.66□□□□□ -2.51
COMMD3-211ENST00000472673 LRRC37A3O60309 1634 aa-0.66□□□□□ -2.51
COMMD3-211ENST00000472673 SVEP1Q4LDE5 3571 aa-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 M0R135 149 aa-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 ARPC5O15511 151 aa-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 NDUFB6O95139 128 aa-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 TSTD1Q8NFU3 115 aa-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 PRG4Q92954 1404 aaPredicted RBP-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 ZNF236Q9UL36 1845 aa-0.66□□□□□ -2.52
COMMD3-211ENST00000472673 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 HIVEP1P15822 2718 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 CTXND1A0A1B0GTU2 59 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 K7EQZ3 153 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 CCL8P80075 99 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 SPAG11AQ6PDA7 123 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 GSKIPQ9P0R6 139 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 GOLGA4Q13439 2230 aaKnown RBP-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 PI4KAP42356 2102 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 PRDM2Q13029 1718 aa-0.67□□□□□ -2.52
COMMD3-211ENST00000472673 NBPF19A0A087WUL8 3843 aa-0.68□□□□□ -2.52
COMMD3-211ENST00000472673 I3L2K1 104 aa-0.68□□□□□ -2.52
COMMD3-211ENST00000472673 NCR2O95944 276 aa-0.68□□□□□ -2.52
COMMD3-211ENST00000472673 NWD2Q9ULI1 1742 aa-0.68□□□□□ -2.52
COMMD3-211ENST00000472673 R4GMQ9 66 aa-0.68□□□□□ -2.52
COMMD3-211ENST00000472673 MRC1P22897 1456 aa-0.68□□□□□ -2.52
COMMD3-211ENST00000472673 HCG22E2RYF7 251 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 S100A3P33764 101 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 DCDP81605 110 aaKnown RBP-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 RBM3P98179 157 aaKnown RBP-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 C10orf128Q5T292 105 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 SCIMPQ6UWF3 145 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 KCNRGQ8N5I3 272 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 LZICQ8WZA0 190 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 TPT1P8Q9HAU6 139 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 DNAJC13O75165 2243 aa-0.69□□□□□ -2.52
COMMD3-211ENST00000472673 ANKRD30AQ9BXX3 1397 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 SPEF2Q9C093 1822 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 TRBV6-1A0A0K0K1D8 114 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 LOC730098B7Z3J9 87 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 SIX6O95475 246 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 KRTAP20-2Q3LI61 65 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 AKAP14Q86UN6 197 aa-0.7□□□□□ -2.52
COMMD3-211ENST00000472673 SMIM4Q8WVI0 70 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms