RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
CCDC78-208ENST00000471861 FOXI1Q12951 378 aa12.13□□□□□ -0.47
CCDC78-208ENST00000471861 LINC00474Q9P2X8 69 aa12.13□□□□□ -0.47
CCDC78-208ENST00000471861 S100A9P06702 114 aaKnown RBP12.12□□□□□ -0.47
CCDC78-208ENST00000471861 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
CCDC78-208ENST00000471861 TPPP3Q9BW30 176 aa12.12□□□□□ -0.47
CCDC78-208ENST00000471861 BATF3Q9NR55 127 aa12.12□□□□□ -0.47
CCDC78-208ENST00000471861 COTL1Q14019 142 aa12.11□□□□□ -0.47
CCDC78-208ENST00000471861 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
CCDC78-208ENST00000471861 DEFA1P59665 94 aa12.1□□□□□ -0.47
CCDC78-208ENST00000471861 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
CCDC78-208ENST00000471861 FXYD6-FXYD2A0A087WZ82 144 aa12.09□□□□□ -0.47
CCDC78-208ENST00000471861 CARD19Q96LW7 228 aa12.09□□□□□ -0.47
CCDC78-208ENST00000471861 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
CCDC78-208ENST00000471861 MED28Q9H204 178 aa12.08□□□□□ -0.48
CCDC78-208ENST00000471861 CYTL1Q9NRR1 136 aa12.08□□□□□ -0.48
CCDC78-208ENST00000471861 FAT4Q6V0I7 4981 aa12.08□□□□□ -0.48
CCDC78-208ENST00000471861 Q6ZNX1 250 aa12.07□□□□□ -0.48
CCDC78-208ENST00000471861 GIPP09681 153 aaPredicted RBP12.06□□□□□ -0.48
CCDC78-208ENST00000471861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-208ENST00000471861 A0A1B0GV50 99 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 A0A1W2PNN7 141 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-208ENST00000471861 NTF3P20783 257 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
CCDC78-208ENST00000471861 PTTG1IPP53801 180 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 CACNG7P62955 275 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 PRR26Q8N8Z3 221 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 PKIGQ9Y2B9 76 aa12.05□□□□□ -0.48
CCDC78-208ENST00000471861 G3V3Q6 166 aa12.04□□□□□ -0.48
CCDC78-208ENST00000471861 XCL1P47992 114 aa12.04□□□□□ -0.48
CCDC78-208ENST00000471861 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
CCDC78-208ENST00000471861 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
CCDC78-208ENST00000471861 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
CCDC78-208ENST00000471861 ZNF664Q8N3J9 261 aa12.03□□□□□ -0.48
CCDC78-208ENST00000471861 OR2D3Q8NGH3 330 aa12.03□□□□□ -0.48
CCDC78-208ENST00000471861 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 PFDN1O60925 122 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 TRGC1P0CF51 173 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 FGF6P10767 208 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 GATD1Q8NB37 220 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 SFT2D1Q8WV19 159 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
CCDC78-208ENST00000471861 CCL25O15444 150 aa12.01□□□□□ -0.49
CCDC78-208ENST00000471861 SYCNQ0VAF6 134 aa12.01□□□□□ -0.49
CCDC78-208ENST00000471861 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
CCDC78-208ENST00000471861 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
CCDC78-208ENST00000471861 OR5A1Q8NGJ0 315 aa12.01□□□□□ -0.49
CCDC78-208ENST00000471861 KRTAP9-6A0A140TA67 174 aa12□□□□□ -0.49
CCDC78-208ENST00000471861 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
CCDC78-208ENST00000471861 CENPWQ5EE01 88 aa12□□□□□ -0.49
CCDC78-208ENST00000471861 RPL39LQ96EH5 51 aaKnown RBP12□□□□□ -0.49
CCDC78-208ENST00000471861 LINC00959A0A1B0GUT2 108 aa11.99□□□□□ -0.49
CCDC78-208ENST00000471861 LCE2AQ5TA79 106 aaPredicted RBP11.99□□□□□ -0.49
CCDC78-208ENST00000471861 FAM213BQ8TBF2 198 aa11.99□□□□□ -0.49
CCDC78-208ENST00000471861 F2Z2F3 143 aa11.98□□□□□ -0.49
CCDC78-208ENST00000471861 H7C423 109 aa11.98□□□□□ -0.49
CCDC78-208ENST00000471861 MT-ND6P03923 174 aa11.98□□□□□ -0.49
CCDC78-208ENST00000471861 BCL2P10415 239 aa11.98□□□□□ -0.49
CCDC78-208ENST00000471861 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
CCDC78-208ENST00000471861 C11orf52Q96A22 123 aa11.98□□□□□ -0.49
CCDC78-208ENST00000471861 NCR2O95944 276 aa11.97□□□□□ -0.49
CCDC78-208ENST00000471861 APCSP02743 223 aa11.97□□□□□ -0.49
CCDC78-208ENST00000471861 CAMPP49913 170 aa11.97□□□□□ -0.49
CCDC78-208ENST00000471861 C9orf116Q5BN46 136 aaPredicted RBP11.97□□□□□ -0.49
CCDC78-208ENST00000471861 KCNRGQ8N5I3 272 aa11.97□□□□□ -0.49
CCDC78-208ENST00000471861 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
CCDC78-208ENST00000471861 ARPC5O15511 151 aa11.96□□□□□ -0.49
CCDC78-208ENST00000471861 CTRLP40313 264 aa11.96□□□□□ -0.49
CCDC78-208ENST00000471861 PHF5AQ7RTV0 110 aaKnown RBP11.96□□□□□ -0.49
CCDC78-208ENST00000471861 ZNF561-AS1K7EIQ3 104 aa11.95□□□□□ -0.5
CCDC78-208ENST00000471861 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
CCDC78-208ENST00000471861 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
CCDC78-208ENST00000471861 IFNA1P01562 189 aa11.94□□□□□ -0.5
CCDC78-208ENST00000471861 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
CCDC78-208ENST00000471861 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
CCDC78-208ENST00000471861 CNFNQ9BYD5 112 aa11.94□□□□□ -0.5
CCDC78-208ENST00000471861 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
CCDC78-208ENST00000471861 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
CCDC78-208ENST00000471861 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
CCDC78-208ENST00000471861 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
CCDC78-208ENST00000471861 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 XKRY2A2RUG3 117 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 RAB19A4D1S5 217 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 SDHAF1A6NFY7 115 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 KRTAP1-4P0C5Y4 121 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 PRR4Q16378 134 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 KRTAP11-1Q8IUC1 163 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 DIRC1Q969H9 104 aa11.92□□□□□ -0.5
CCDC78-208ENST00000471861 H0Y9J4 135 aa11.91□□□□□ -0.5
CCDC78-208ENST00000471861 APOMO95445 188 aa11.91□□□□□ -0.5
CCDC78-208ENST00000471861 ESDP10768 282 aa11.91□□□□□ -0.5
CCDC78-208ENST00000471861 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-208ENST00000471861 CCL20P78556 96 aa11.91□□□□□ -0.5
CCDC78-208ENST00000471861 TWIST1Q15672 202 aa11.91□□□□□ -0.5
CCDC78-208ENST00000471861 UMAD1C9J7I0 102 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms