RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
SSR4-207ENST00000471724 MRPL18Q9H0U6 180 aaKnown RBP9.6□□□□□ -0.87
SSR4-207ENST00000471724 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
SSR4-207ENST00000471724 IGLV2-18A0A075B6J9 118 aa9.59□□□□□ -0.87
SSR4-207ENST00000471724 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
SSR4-207ENST00000471724 C10orf126Q8N4M7 172 aa9.59□□□□□ -0.87
SSR4-207ENST00000471724 CHCHD5Q9BSY4 110 aa9.59□□□□□ -0.87
SSR4-207ENST00000471724 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
SSR4-207ENST00000471724 HYDINQ4G0P3 5121 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 TRAV9-2A0A087WT02 112 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 FCER1GP30273 86 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 FABP9Q0Z7S8 132 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 NIT1Q86X76 327 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 TRAPPC1Q9Y5R8 145 aa9.58□□□□□ -0.88
SSR4-207ENST00000471724 A0A087WX48 190 aa9.57□□□□□ -0.88
SSR4-207ENST00000471724 UBE2L6O14933 153 aa9.57□□□□□ -0.88
SSR4-207ENST00000471724 TSHBP01222 138 aa9.57□□□□□ -0.88
SSR4-207ENST00000471724 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
SSR4-207ENST00000471724 H7C423 109 aa9.56□□□□□ -0.88
SSR4-207ENST00000471724 KIAA1644Q3SXP7 199 aa9.56□□□□□ -0.88
SSR4-207ENST00000471724 BTF3P20290 206 aaKnown RBP9.55□□□□□ -0.88
SSR4-207ENST00000471724 Q6ZR54 194 aa9.55□□□□□ -0.88
SSR4-207ENST00000471724 ALKBH7Q9BT30 221 aaPredicted RBP9.55□□□□□ -0.88
SSR4-207ENST00000471724 NXT2Q9NPJ8 142 aaKnown RBP9.55□□□□□ -0.88
SSR4-207ENST00000471724 K7EMI3 77 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 IGHV3-30P01768 117 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 IGHV3-30-5P0DP03 117 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 RAB5AP20339 215 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 LAGE3Q14657 143 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
SSR4-207ENST00000471724 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 M0R2N4 97 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 SCO1O75880 301 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 GAGE6Q13070 117 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 MPV17L2Q567V2 206 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 Q8N8P6 123 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 TMEM18Q96B42 140 aa9.53□□□□□ -0.88
SSR4-207ENST00000471724 KMT2AQ03164 3969 aa9.52□□□□□ -0.88
SSR4-207ENST00000471724 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
SSR4-207ENST00000471724 ESDP10768 282 aa9.52□□□□□ -0.89
SSR4-207ENST00000471724 ZNF25P17030 456 aaPredicted RBP9.52□□□□□ -0.89
SSR4-207ENST00000471724 AMMECR1LQ6DCA0 310 aa9.52□□□□□ -0.89
SSR4-207ENST00000471724 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
SSR4-207ENST00000471724 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
SSR4-207ENST00000471724 COLCA2A8K830 154 aa9.51□□□□□ -0.89
SSR4-207ENST00000471724 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
SSR4-207ENST00000471724 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
SSR4-207ENST00000471724 IBA57-AS1B1ANH7 110 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 CRPP02741 224 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SSR4-207ENST00000471724 RBX1P62877 108 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 NFE4Q86UQ8 179 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 Q8N3U1 123 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
SSR4-207ENST00000471724 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 FGF6P10767 208 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 G0S2P27469 103 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
SSR4-207ENST00000471724 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 RNASEKQ6P5S7 137 aaKnown RBP9.49□□□□□ -0.89
SSR4-207ENST00000471724 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
SSR4-207ENST00000471724 Q8N976 141 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 KLK12Q9UKR0 248 aa9.49□□□□□ -0.89
SSR4-207ENST00000471724 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
SSR4-207ENST00000471724 FA2HQ7L5A8 372 aa9.48□□□□□ -0.89
SSR4-207ENST00000471724 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
SSR4-207ENST00000471724 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
SSR4-207ENST00000471724 VPS13DQ5THJ4 4388 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 TRGC2P03986 189 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 Q0VG73 95 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 RMI2Q96E14 147 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
SSR4-207ENST00000471724 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
SSR4-207ENST00000471724 LINC01549A6NIU2 74 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 RAB5BP61020 215 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 MIAQ16674 131 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 Q9HAA7 133 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 AP5S1Q9NUS5 200 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 UBE2D4Q9Y2X8 147 aa9.46□□□□□ -0.9
SSR4-207ENST00000471724 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
SSR4-207ENST00000471724 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
SSR4-207ENST00000471724 LINC00336Q6ZUF6 198 aa9.45□□□□□ -0.9
SSR4-207ENST00000471724 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
SSR4-207ENST00000471724 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
SSR4-207ENST00000471724 REG3AQ06141 175 aa9.44□□□□□ -0.9
SSR4-207ENST00000471724 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
SSR4-207ENST00000471724 LINC00269Q8N2A0 174 aa9.44□□□□□ -0.9
SSR4-207ENST00000471724 TM2D2Q9BX73 214 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms