RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 BCL9LQ86UU0 1499 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 PRG4Q92954 1404 aaPredicted RBP-0.77□□□□□ -2.53
RBM39-228ENST00000471635 IL5P05113 134 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 SMIM6P0DI80 62 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 HAMPP81172 84 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 KRTAP19-8Q3LI54 63 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 SMIM3Q9BZL3 60 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 LRP1BQ9NZR2 4599 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 ATRQ13535 2644 aa-0.77□□□□□ -2.53
RBM39-228ENST00000471635 KDM3BQ7LBC6 1761 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 LRP6O75581 1613 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 C10orf71Q711Q0 1435 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 CASKIN1Q8WXD9 1431 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 SCGB1A1P11684 91 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 PIPP12273 146 aaPredicted RBP-0.78□□□□□ -2.53
RBM39-228ENST00000471635 CBLN1P23435 193 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 CCL18P55774 89 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 B2MP61769 119 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 S100A7L2Q5SY68 101 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 CTAGE3PQ8IX95 158 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 PSMG3Q9BT73 122 aaPredicted RBP-0.78□□□□□ -2.53
RBM39-228ENST00000471635 CHD8Q9HCK8 2581 aa-0.78□□□□□ -2.53
RBM39-228ENST00000471635 NPFFO15130 113 aa-0.79□□□□□ -2.54
RBM39-228ENST00000471635 NCR2O95944 276 aa-0.79□□□□□ -2.54
RBM39-228ENST00000471635 SPRR2BP35325 72 aa-0.79□□□□□ -2.54
RBM39-228ENST00000471635 MYO7BQ6PIF6 2116 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 I3L2K1 104 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 CKS1BP61024 79 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 CCL8P80075 99 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 KRTAP20-2Q3LI61 65 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 SPTSSAQ969W0 71 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 AGPAT4-IT1Q9H0P7 198 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 HERC1Q15751 4861 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 PXDNQ92626 1479 aa-0.8□□□□□ -2.54
RBM39-228ENST00000471635 SETXQ7Z333 2677 aaKnown RBP-0.81□□□□□ -2.54
RBM39-228ENST00000471635 PRDM2Q13029 1718 aa-0.81□□□□□ -2.54
RBM39-228ENST00000471635 FLNBO75369 2602 aaKnown RBP-0.81□□□□□ -2.54
RBM39-228ENST00000471635 NDUFB6O95139 128 aa-0.81□□□□□ -2.54
RBM39-228ENST00000471635 RRAS2P62070 204 aaPredicted RBP-0.81□□□□□ -2.54
RBM39-228ENST00000471635 TP53AIP1Q9HCN2 124 aa-0.81□□□□□ -2.54
RBM39-228ENST00000471635 ERCC6L2Q5T890 1561 aa-0.82□□□□□ -2.54
RBM39-228ENST00000471635 URB1O60287 2271 aaKnown RBP-0.82□□□□□ -2.54
RBM39-228ENST00000471635 K7EQZ3 153 aa-0.82□□□□□ -2.54
RBM39-228ENST00000471635 SNCGO76070 127 aa-0.82□□□□□ -2.54
RBM39-228ENST00000471635 GSKIPQ9P0R6 139 aa-0.82□□□□□ -2.54
RBM39-228ENST00000471635 MAP1AP78559 2803 aaPredicted RBP-0.83□□□□□ -2.54
RBM39-228ENST00000471635 MRC1P22897 1456 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 FXYD6-FXYD2A0A087WZ82 144 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 J3QR89 54 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 M0R135 149 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 M0R2Z0 102 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 PPP1R17O96001 155 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 ALX1Q15699 326 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 SCIMPQ6UWF3 145 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 SEC11CQ9BY50 192 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 KMT2CQ8NEZ4 4911 aaKnown RBP-0.83□□□□□ -2.54
RBM39-228ENST00000471635 STAB2Q8WWQ8 2551 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 FHAD1B1AJZ9 1412 aa-0.83□□□□□ -2.54
RBM39-228ENST00000471635 NWD2Q9ULI1 1742 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 ZNF236Q9UL36 1845 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 IFT140Q96RY7 1462 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 K7ERU9 68 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 ARPC5O15511 151 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 SIX6O95475 246 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 DCDP81605 110 aaKnown RBP-0.84□□□□□ -2.54
RBM39-228ENST00000471635 R4GMQ9 66 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 MYH8P13535 1937 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 ANKRD30AQ9BXX3 1397 aa-0.84□□□□□ -2.54
RBM39-228ENST00000471635 ZNF518AQ6AHZ1 1483 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 SPAARA0A1B0GVQ0 90 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 HCG22E2RYF7 251 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 MT4P47944 62 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 SPAG11AQ6PDA7 123 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 SMIM4Q8WVI0 70 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 PYDC1Q8WXC3 89 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 PI4KAP42356 2102 aa-0.85□□□□□ -2.55
RBM39-228ENST00000471635 LRRC37A2A6NM11 1700 aa-0.86□□□□□ -2.55
RBM39-228ENST00000471635 CNOT1A5YKK6 2376 aaKnown RBP-0.86□□□□□ -2.55
RBM39-228ENST00000471635 GOLGA4Q13439 2230 aaKnown RBP-0.86□□□□□ -2.55
RBM39-228ENST00000471635 TRBV6-1A0A0K0K1D8 114 aa-0.86□□□□□ -2.55
RBM39-228ENST00000471635 CTXND1A0A1B0GTU2 59 aa-0.86□□□□□ -2.55
RBM39-228ENST00000471635 S100A3P33764 101 aa-0.86□□□□□ -2.55
RBM39-228ENST00000471635 NBEAL1Q6ZS30 2694 aa-0.86□□□□□ -2.55
RBM39-228ENST00000471635 PAPPAQ13219 1627 aa-0.86□□□□□ -2.55
RBM39-228ENST00000471635 GUCA1AP43080 201 aaPredicted RBP-0.87□□□□□ -2.55
RBM39-228ENST00000471635 KCNRGQ8N5I3 272 aa-0.87□□□□□ -2.55
RBM39-228ENST00000471635 TSTD1Q8NFU3 115 aa-0.87□□□□□ -2.55
RBM39-228ENST00000471635 AMELXQ99217 191 aa-0.87□□□□□ -2.55
RBM39-228ENST00000471635 SDF2Q99470 211 aa-0.87□□□□□ -2.55
RBM39-228ENST00000471635 LINC00472Q9H8W2 130 aa-0.87□□□□□ -2.55
RBM39-228ENST00000471635 PRKDCP78527 4128 aaKnown RBP-0.87□□□□□ -2.55
RBM39-228ENST00000471635 FAT1Q14517 4588 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 CREBBPQ92793 2442 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 TRAV13-2A0A0B4J235 113 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 C10orf128Q5T292 105 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 AKAP14Q86UN6 197 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 LENEPQ9Y5L5 61 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 V9GYH0 126 aa-0.88□□□□□ -2.55
RBM39-228ENST00000471635 TSC2P49815 1807 aa-0.89□□□□□ -2.55
RBM39-228ENST00000471635 SPRR1BP22528 89 aa-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms