RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 ELOBQ15370 118 aa11.87□□□□□ -0.51
VPS72-204ENST00000471423 ATRAIDQ6UW56 229 aa11.87□□□□□ -0.51
VPS72-204ENST00000471423 NRACQ8N912 160 aa11.87□□□□□ -0.51
VPS72-204ENST00000471423 Q8N976 141 aa11.87□□□□□ -0.51
VPS72-204ENST00000471423 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
VPS72-204ENST00000471423 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 I3L3M4 83 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 PMCHP20382 165 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 CKS2P33552 79 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 RBX1P62877 108 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 BTF3L4Q96K17 158 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
VPS72-204ENST00000471423 DNAH5Q8TE73 4624 aa11.85□□□□□ -0.51
VPS72-204ENST00000471423 PSCAO43653 123 aa11.85□□□□□ -0.51
VPS72-204ENST00000471423 PPP1R17O96001 155 aa11.85□□□□□ -0.51
VPS72-204ENST00000471423 APCSP02743 223 aa11.85□□□□□ -0.51
VPS72-204ENST00000471423 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
VPS72-204ENST00000471423 POLR2KP53803 58 aaKnown RBP11.85□□□□□ -0.51
VPS72-204ENST00000471423 TMEM242Q9NWH2 141 aa11.85□□□□□ -0.51
VPS72-204ENST00000471423 D6R8Y8 96 aa11.84□□□□□ -0.51
VPS72-204ENST00000471423 UBE2L6O14933 153 aa11.84□□□□□ -0.51
VPS72-204ENST00000471423 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
VPS72-204ENST00000471423 CLRN3Q8NCR9 226 aa11.84□□□□□ -0.51
VPS72-204ENST00000471423 TRBV27A0A0K0K1C4 114 aa11.83□□□□□ -0.52
VPS72-204ENST00000471423 C7orf77A4D0Y5 90 aa11.83□□□□□ -0.52
VPS72-204ENST00000471423 TSHBP01222 138 aa11.83□□□□□ -0.52
VPS72-204ENST00000471423 CRPP02741 224 aa11.83□□□□□ -0.52
VPS72-204ENST00000471423 RHEBQ15382 184 aa11.83□□□□□ -0.52
VPS72-204ENST00000471423 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
VPS72-204ENST00000471423 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
VPS72-204ENST00000471423 CLPSL2Q6UWE3 100 aa11.82□□□□□ -0.52
VPS72-204ENST00000471423 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
VPS72-204ENST00000471423 TM2D2Q9BX73 214 aa11.82□□□□□ -0.52
VPS72-204ENST00000471423 RPS10P5Q9NQ39 176 aa11.82□□□□□ -0.52
VPS72-204ENST00000471423 A0A087WTM6 91 aa11.81□□□□□ -0.52
VPS72-204ENST00000471423 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
VPS72-204ENST00000471423 APOC3P02656 99 aa11.81□□□□□ -0.52
VPS72-204ENST00000471423 Q0VG73 95 aa11.81□□□□□ -0.52
VPS72-204ENST00000471423 SPATA12Q7Z6I5 190 aa11.81□□□□□ -0.52
VPS72-204ENST00000471423 RMI2Q96E14 147 aa11.81□□□□□ -0.52
VPS72-204ENST00000471423 IGLV4-60A0A075B6I1 120 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 TRBV24-1A0A075B6N3 115 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 VCYO14598 125 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 EREGO14944 169 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 NPYP01303 97 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 PPBPP02775 128 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 S100PP25815 95 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 NDUFA5Q16718 116 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 ORMDL3Q8N138 153 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 LINC00269Q8N2A0 174 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 LRP1BQ9NZR2 4599 aa11.8□□□□□ -0.52
VPS72-204ENST00000471423 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
VPS72-204ENST00000471423 FCER1GP30273 86 aa11.79□□□□□ -0.52
VPS72-204ENST00000471423 KRTAP10-2P60368 255 aa11.79□□□□□ -0.52
VPS72-204ENST00000471423 TMEM136Q6ZRR5 245 aa11.79□□□□□ -0.52
VPS72-204ENST00000471423 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
VPS72-204ENST00000471423 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
VPS72-204ENST00000471423 ESDP10768 282 aa11.78□□□□□ -0.52
VPS72-204ENST00000471423 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
VPS72-204ENST00000471423 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
VPS72-204ENST00000471423 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
VPS72-204ENST00000471423 COX11Q9Y6N1 276 aa11.78□□□□□ -0.52
VPS72-204ENST00000471423 H7C423 109 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 PHOX2AO14813 284 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 FGF6P10767 208 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.53
VPS72-204ENST00000471423 REG3AQ06141 175 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 MIAQ16674 131 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 RNASEKQ6P5S7 137 aaKnown RBP11.77□□□□□ -0.53
VPS72-204ENST00000471423 SVBPQ8N300 66 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 MAPKAPK5-AS1Q8N8E1 139 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 C1orf43Q9BWL3 253 aa11.77□□□□□ -0.53
VPS72-204ENST00000471423 SNAPINO95295 136 aa11.76□□□□□ -0.53
VPS72-204ENST00000471423 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.53
VPS72-204ENST00000471423 KIAA1109Q2LD37 5005 aa11.75□□□□□ -0.53
VPS72-204ENST00000471423 C16orf90A8MZG2 172 aa11.75□□□□□ -0.53
VPS72-204ENST00000471423 LECT2O14960 151 aa11.75□□□□□ -0.53
VPS72-204ENST00000471423 WFDC2Q14508 124 aa11.75□□□□□ -0.53
VPS72-204ENST00000471423 SLC7A5P1Q8MH63 180 aa11.74□□□□□ -0.53
VPS72-204ENST00000471423 IGLV10-54A0A075B6I4 117 aa11.73□□□□□ -0.53
VPS72-204ENST00000471423 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
VPS72-204ENST00000471423 Q8N814 137 aa11.73□□□□□ -0.53
VPS72-204ENST00000471423 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
VPS72-204ENST00000471423 LAMTOR2Q9Y2Q5 125 aa11.73□□□□□ -0.53
VPS72-204ENST00000471423 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
VPS72-204ENST00000471423 HLA-DQA1P01909 254 aa11.72□□□□□ -0.53
VPS72-204ENST00000471423 TMEM101Q96IK0 257 aa11.72□□□□□ -0.53
VPS72-204ENST00000471423 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.53
VPS72-204ENST00000471423 TCAPO15273 167 aa11.71□□□□□ -0.53
VPS72-204ENST00000471423 MRPL52Q86TS9 123 aaKnown RBP11.71□□□□□ -0.53
VPS72-204ENST00000471423 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
VPS72-204ENST00000471423 GNB1LQ9BYB4 327 aa11.71□□□□□ -0.53
VPS72-204ENST00000471423 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.53
VPS72-204ENST00000471423 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms