RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 LGALS9CQ6DKI2 356 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 ERASQ7Z444 233 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 NEXN-AS1Q8NBZ9 246 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 TMEM141Q96I45 108 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 PRADC1Q9BSG0 188 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
PTPRE-207ENST00000471218 TRAV12-1A0A0B4J245 112 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 IGHV4-28A0A0C4DH34 117 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.48□□□□□ -1.37
PTPRE-207ENST00000471218 SCGB1D1O95968 90 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 PRM2P04554 102 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 COTL1Q14019 142 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 ZNF479Q96JC4 524 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 PRO0255Q9UI72 69 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 KLK5Q9Y337 293 aaPredicted RBP6.48□□□□□ -1.37
PTPRE-207ENST00000471218 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
PTPRE-207ENST00000471218 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 H7C423 109 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 GAGE7O76087 117 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 TSHBP01222 138 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 GAGE12FP0CL80 117 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 GAGE12GP0CL81 117 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 GAGE12IP0CL82 117 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 UBE2D3P61077 147 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 UBE2D2P62837 147 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 C2orf66Q6UXQ4 117 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 SLC25A29Q8N8R3 303 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 TIMM21Q9BVV7 248 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 SPANXA1Q9NS26 97 aa6.47□□□□□ -1.37
PTPRE-207ENST00000471218 TRAV26-1A0A087WT03 109 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 TRGV4A0A0C4DH28 118 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 LY6G6CO95867 125 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 ATP5G1P05496 136 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 LINC00694P0DN24 101 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 FHL2Q14192 279 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 FAM222AQ5U5X8 452 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 Q8N976 141 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 C20orf203Q8NBC4 194 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 LINC00476Q8WZB0 136 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 SCGB3A1Q96QR1 104 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
PTPRE-207ENST00000471218 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 H3BNG1 76 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 PLNP26678 52 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 DAD1P61803 113 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 Q6ZN92 141 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 Q6ZSN1 163 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 HHLA3Q9XRX5 114 aa6.45□□□□□ -1.38
PTPRE-207ENST00000471218 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
PTPRE-207ENST00000471218 TRAV9-2A0A087WT02 112 aa6.44□□□□□ -1.38
PTPRE-207ENST00000471218 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
PTPRE-207ENST00000471218 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
PTPRE-207ENST00000471218 TSTD3H0UI37 97 aa6.44□□□□□ -1.38
PTPRE-207ENST00000471218 EMP1P54849 157 aa6.44□□□□□ -1.38
PTPRE-207ENST00000471218 PKIAP61925 76 aa6.44□□□□□ -1.38
PTPRE-207ENST00000471218 MRPL52Q86TS9 123 aaKnown RBP6.44□□□□□ -1.38
PTPRE-207ENST00000471218 A0A087WX48 190 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 PRSS1P07477 247 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 DEFB130BP0DP73 79 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 DEFB130AP0DP74 79 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 TIRAPP58753 221 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 MRPS36P82909 103 aaKnown RBP6.43□□□□□ -1.38
PTPRE-207ENST00000471218 ODF1Q14990 250 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 CEMP1Q6PRD7 247 aaPredicted RBP6.43□□□□□ -1.38
PTPRE-207ENST00000471218 ZNRF2Q8NHG8 242 aa6.43□□□□□ -1.38
PTPRE-207ENST00000471218 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
PTPRE-207ENST00000471218 ALMS1Q8TCU4 4167 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 NACAE9PAV3 2078 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 F8VRH5 84 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 DPM2O94777 84 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 P0DMU3 169 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 FAM231AP0DMU4 169 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 FAM231CP0DMU5 169 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 ZNF25P17030 456 aaPredicted RBP6.42□□□□□ -1.38
PTPRE-207ENST00000471218 TCTAP57738 103 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 PMVKQ15126 192 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 LINC00173Q6ZV60 143 aa6.42□□□□□ -1.38
PTPRE-207ENST00000471218 TRBV25-1A0A075B6N4 114 aa6.41□□□□□ -1.38
PTPRE-207ENST00000471218 PAX4O43316 350 aa6.41□□□□□ -1.38
PTPRE-207ENST00000471218 CHCHD7Q9BUK0 85 aa6.41□□□□□ -1.38
PTPRE-207ENST00000471218 RETNQ9HD89 108 aa6.41□□□□□ -1.38
PTPRE-207ENST00000471218 IGKCP01834 107 aa6.4□□□□□ -1.38
PTPRE-207ENST00000471218 MRPL23Q16540 153 aaKnown RBP6.4□□□□□ -1.38
PTPRE-207ENST00000471218 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.38
PTPRE-207ENST00000471218 BAALCQ8WXS3 180 aa6.4□□□□□ -1.38
PTPRE-207ENST00000471218 TMEM243Q9BU79 118 aa6.4□□□□□ -1.38
PTPRE-207ENST00000471218 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 GYPEP15421 78 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 SEC11AP67812 179 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 GAGE1Q13065 139 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 GAGE4Q13068 117 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 GAGE5Q13069 117 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
PTPRE-207ENST00000471218 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms