RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 E9PLD3 99 aa12.17□□□□□ -0.46
SMARCD3-206ENST00000470588 NPSP0C0P6 89 aa12.17□□□□□ -0.46
SMARCD3-206ENST00000470588 PRIMA1Q86XR5 153 aa12.17□□□□□ -0.46
SMARCD3-206ENST00000470588 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
SMARCD3-206ENST00000470588 CIDEAO60543 219 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 GAGE1Q13065 139 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 MAPKAPK5-AS1Q8N8E1 139 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 WFDC9Q8NEX5 89 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 OVOL2Q9BRP0 275 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 Q9UF83 564 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 COX11Q9Y6N1 276 aa12.16□□□□□ -0.46
SMARCD3-206ENST00000470588 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 TRAV8-6A0A0B4J262 113 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 C11orf86A6NJI1 115 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 CRYBA4P53673 196 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 RRN3P1Q2M238 152 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 Q6ZTI0 123 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 OR11H2Q8NH07 326 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 TTTY13Q9BZ97 58 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 HERVK_113P61574 105 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 VCX2Q9H322 139 aa12.15□□□□□ -0.46
SMARCD3-206ENST00000470588 IGLV4-3A0A075B6K6 122 aa12.14□□□□□ -0.47
SMARCD3-206ENST00000470588 TRBV10-1A0A0K0K1A3 114 aa12.14□□□□□ -0.47
SMARCD3-206ENST00000470588 PLAC8L1A1L4L8 177 aa12.14□□□□□ -0.47
SMARCD3-206ENST00000470588 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
SMARCD3-206ENST00000470588 ZNF479Q96JC4 524 aa12.14□□□□□ -0.47
SMARCD3-206ENST00000470588 ATRQ13535 2644 aa12.14□□□□□ -0.47
SMARCD3-206ENST00000470588 A6NDN8 102 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 TAX1BP3O14907 124 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 COTL1Q14019 142 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 SPATA3Q8NHX4 192 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 PRADC1Q9BSG0 188 aa12.13□□□□□ -0.47
SMARCD3-206ENST00000470588 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
SMARCD3-206ENST00000470588 TAL2Q16559 108 aa12.12□□□□□ -0.47
SMARCD3-206ENST00000470588 SPANXA1Q9NS26 97 aa12.12□□□□□ -0.47
SMARCD3-206ENST00000470588 K7EQD1 137 aa12.11□□□□□ -0.47
SMARCD3-206ENST00000470588 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
SMARCD3-206ENST00000470588 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
SMARCD3-206ENST00000470588 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
SMARCD3-206ENST00000470588 AMELXQ99217 191 aa12.11□□□□□ -0.47
SMARCD3-206ENST00000470588 TENM1Q9UKZ4 2725 aa12.11□□□□□ -0.47
SMARCD3-206ENST00000470588 EMP1P54849 157 aa12.1□□□□□ -0.47
SMARCD3-206ENST00000470588 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
SMARCD3-206ENST00000470588 WIPF1O43516 503 aa12.1□□□□□ -0.47
SMARCD3-206ENST00000470588 TMEM170BQ5T4T1 132 aa12.1□□□□□ -0.47
SMARCD3-206ENST00000470588 GAGE12BA1L429 117 aa12.09□□□□□ -0.47
SMARCD3-206ENST00000470588 GAGE7O76087 117 aa12.09□□□□□ -0.47
SMARCD3-206ENST00000470588 GAGE12FP0CL80 117 aa12.09□□□□□ -0.47
SMARCD3-206ENST00000470588 GAGE12GP0CL81 117 aa12.09□□□□□ -0.47
SMARCD3-206ENST00000470588 GAGE12IP0CL82 117 aa12.09□□□□□ -0.47
SMARCD3-206ENST00000470588 Q6ZVH6 145 aa12.09□□□□□ -0.47
SMARCD3-206ENST00000470588 TRGV2A0A075B6R0 118 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 H3BRM9 83 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 DAZ4Q86SG3 579 aaKnown RBP12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 TIMM21Q9BVV7 248 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 TM2D2Q9BX73 214 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 DAZ3Q9NR90 486 aaKnown RBP12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 UBE2D4Q9Y2X8 147 aa12.08□□□□□ -0.48
SMARCD3-206ENST00000470588 SLC25A29Q8N8R3 303 aa12.07□□□□□ -0.48
SMARCD3-206ENST00000470588 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
SMARCD3-206ENST00000470588 CEND1Q8N111 149 aa12.07□□□□□ -0.48
SMARCD3-206ENST00000470588 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
SMARCD3-206ENST00000470588 ZNF815PA8K554 130 aa12.06□□□□□ -0.48
SMARCD3-206ENST00000470588 GCSHP23434 173 aa12.06□□□□□ -0.48
SMARCD3-206ENST00000470588 UBE2D3P61077 147 aa12.06□□□□□ -0.48
SMARCD3-206ENST00000470588 UBE2D2P62837 147 aa12.06□□□□□ -0.48
SMARCD3-206ENST00000470588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 TMEM223A0PJW6 202 aa12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 KIR2DL5BQ8NHK3 375 aa12.05□□□□□ -0.48
SMARCD3-206ENST00000470588 LEPROTO15243 131 aa12.04□□□□□ -0.48
SMARCD3-206ENST00000470588 SMIM13P0DJ93 91 aa12.04□□□□□ -0.48
SMARCD3-206ENST00000470588 APOC4P55056 127 aa12.04□□□□□ -0.48
SMARCD3-206ENST00000470588 UBE2V1Q13404 147 aa12.04□□□□□ -0.48
SMARCD3-206ENST00000470588 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
SMARCD3-206ENST00000470588 TRGV4A0A0C4DH28 118 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 GAGE4Q13068 117 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 GAGE5Q13069 117 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 VAMP3Q15836 100 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 MAST4O15021 2626 aa12.03□□□□□ -0.48
SMARCD3-206ENST00000470588 C9orf118A6NHY6 69 aa12.02□□□□□ -0.48
SMARCD3-206ENST00000470588 PTTG1IPP53801 180 aa12.02□□□□□ -0.48
SMARCD3-206ENST00000470588 FXYD2P54710 66 aa12.02□□□□□ -0.48
SMARCD3-206ENST00000470588 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.48
SMARCD3-206ENST00000470588 GTSF1LQ9H1H1 148 aa12.02□□□□□ -0.48
SMARCD3-206ENST00000470588 TINCRA0A1B0GVN0 87 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms