RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 NPVFQ9HCQ7 196 aa-0.59□□□□□ -2.5
TPR-204ENST00000469463 MAP1BP46821 2468 aaKnown RBP-0.59□□□□□ -2.5
TPR-204ENST00000469463 PBRM1Q86U86 1689 aa-0.59□□□□□ -2.5
TPR-204ENST00000469463 PKHD1L1Q86WI1 4243 aa-0.59□□□□□ -2.5
TPR-204ENST00000469463 ATRQ13535 2644 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 CSPG4Q6UVK1 2322 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 ADGRB1O14514 1584 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 BICRAQ9NZM4 1560 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 CHD8Q9HCK8 2581 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 K7EQZ3 153 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 NEFHP12036 1026 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 LINC01545Q5VT33 79 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 RPRMQ9NS64 109 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 VPS13DQ5THJ4 4388 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 KDM3BQ7LBC6 1761 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 LRRC37A3O60309 1634 aa-0.6□□□□□ -2.51
TPR-204ENST00000469463 IQSEC2Q5JU85 1478 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 COL12A1Q99715 3063 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 MGAM2Q2M2H8 2515 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 NRXN2Q9P2S2 1712 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 ZNF609O15014 1411 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 DNAH3Q8TD57 4116 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 MXRA5Q9NR99 2828 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 A0A1B0GX51 115 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 M0R2T5 61 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 NPFFO15130 113 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 BCE1O60756 84 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 SPRR1BP22528 89 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 UBE2D1P51668 147 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 LINC00472Q9H8W2 130 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 TP53AIP1Q9HCN2 124 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 SPCS1Q9Y6A9 102 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 LRP6O75581 1613 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 PLXNB2O15031 1838 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 PARP14Q460N5 1801 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
TPR-204ENST00000469463 PCNX1Q96RV3 2341 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 PITX3O75364 302 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 MT1AP04731 61 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 PIRTP0C851 137 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 ALX1Q15699 326 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 CCDC153Q494R4 210 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 C9orf116Q5BN46 136 aaPredicted RBP-0.62□□□□□ -2.51
TPR-204ENST00000469463 SPANXN1Q5VSR9 72 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 ZNF818PQ6ZRF7 136 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 CTAGE3PQ8IX95 158 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 SPRR2FQ96RM1 72 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 SDF2Q99470 211 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 SPANXCQ9NY87 97 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 ARFGEF1Q9Y6D6 1849 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 SPTBN1Q01082 2364 aaKnown RBP-0.62□□□□□ -2.51
TPR-204ENST00000469463 ANKRD11Q6UB99 2663 aaPredicted RBP-0.62□□□□□ -2.51
TPR-204ENST00000469463 KIAA0100Q14667 2235 aaKnown RBP-0.62□□□□□ -2.51
TPR-204ENST00000469463 USF3Q68DE3 2245 aa-0.62□□□□□ -2.51
TPR-204ENST00000469463 MUC22E2RYF6 1773 aaPredicted RBP-0.62□□□□□ -2.51
TPR-204ENST00000469463 PAPPAQ13219 1627 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 LRRC37A2A6NM11 1700 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 IFT172Q9UG01 1749 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 TRBV20-1A0A075B6N2 111 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 SPAARA0A1B0GVQ0 90 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 H0YJX3 145 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 DBIP07108 87 aaKnown RBP-0.63□□□□□ -2.51
TPR-204ENST00000469463 COX6B1P14854 86 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 CCL18P55774 89 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 BAGE3Q86Y29 109 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 MMGT1Q8N4V1 131 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 AMELXQ99217 191 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 SAR1AQ9NR31 198 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 GVINP1Q7Z2Y8 2422 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 ERCC6Q03468 1493 aa-0.63□□□□□ -2.51
TPR-204ENST00000469463 CNOT1A5YKK6 2376 aaKnown RBP-0.63□□□□□ -2.51
TPR-204ENST00000469463 PRRC2CQ9Y520 2896 aaKnown RBP-0.63□□□□□ -2.51
TPR-204ENST00000469463 TULP4Q9NRJ4 1543 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 WNK3Q9BYP7 1800 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 DNAH9Q9NYC9 4486 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 TMEM2Q9UHN6 1383 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 TRBV6-1A0A0K0K1D8 114 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 M0R129 80 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 UBE2G1P62253 170 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 CCL8P80075 99 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 MORN2Q502X0 79 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 MIC13Q5XKP0 118 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 C10orf82Q8WW14 230 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 SCN3BQ9NY72 215 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 MYH13Q9UKX3 1938 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 DAPK1P53355 1430 aa-0.64□□□□□ -2.51
TPR-204ENST00000469463 SPTA1P02549 2419 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 WDR87Q6ZQQ6 2873 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 WDR7Q9Y4E6 1490 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 APOC4-APOC2K7ER74 178 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 TSPAN19P0C672 248 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 NBEAP1P0C6P0 100 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 DCDP81605 110 aaKnown RBP-0.65□□□□□ -2.51
TPR-204ENST00000469463 CFAP126Q5VTH2 177 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 SPAG11AQ6PDA7 123 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 VSTM2AQ8TAG5 236 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 AGPAT4-IT1Q9H0P7 198 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 SPANXA1Q9NS26 97 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 DNAH2Q9P225 4427 aa-0.65□□□□□ -2.51
TPR-204ENST00000469463 NSD3Q9BZ95 1437 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms