RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 VAMP3Q15836 100 aa10.21□□□□□ -0.77
COL27A1-203ENST00000468565 hDV102S1A0JD36 115 aa10.21□□□□□ -0.78
COL27A1-203ENST00000468565 ASIPP42127 132 aa10.21□□□□□ -0.78
COL27A1-203ENST00000468565 DNAH10Q8IVF4 4471 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 BIRC6Q9NR09 4857 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 TRAV12-3A0A0B4J271 114 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 C7orf71A4D174 169 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 DEFB130BP0DP73 79 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 DEFB130AP0DP74 79 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 EVI2AP22794 236 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
COL27A1-203ENST00000468565 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 Q6ZQT7 251 aa10.2□□□□□ -0.78
COL27A1-203ENST00000468565 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 S100A4P26447 101 aaKnown RBP10.19□□□□□ -0.78
COL27A1-203ENST00000468565 POM121L12Q8N7R1 296 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 ATP5G1P05496 136 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 Q8N8P6 123 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 LINC00467Q9BRT7 94 aa10.19□□□□□ -0.78
COL27A1-203ENST00000468565 NOP10Q9NPE3 64 aaKnown RBP10.19□□□□□ -0.78
COL27A1-203ENST00000468565 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
COL27A1-203ENST00000468565 FCER1GP30273 86 aa10.18□□□□□ -0.78
COL27A1-203ENST00000468565 ANXA2RQ3ZCQ2 193 aa10.18□□□□□ -0.78
COL27A1-203ENST00000468565 SLC25A34Q6PIV7 304 aa10.18□□□□□ -0.78
COL27A1-203ENST00000468565 LINC00612Q8N6U2 182 aa10.18□□□□□ -0.78
COL27A1-203ENST00000468565 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
COL27A1-203ENST00000468565 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
COL27A1-203ENST00000468565 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
COL27A1-203ENST00000468565 GATA1P15976 413 aaPredicted RBP10.17□□□□□ -0.78
COL27A1-203ENST00000468565 SCRT2Q9NQ03 307 aa10.17□□□□□ -0.78
COL27A1-203ENST00000468565 PHLDA3Q9Y5J5 127 aa10.17□□□□□ -0.78
COL27A1-203ENST00000468565 NRACQ8N912 160 aa10.16□□□□□ -0.78
COL27A1-203ENST00000468565 F5H768 121 aa10.15□□□□□ -0.78
COL27A1-203ENST00000468565 M0R381 172 aa10.15□□□□□ -0.78
COL27A1-203ENST00000468565 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
COL27A1-203ENST00000468565 DPH3P1Q9H4G8 78 aa10.15□□□□□ -0.78
COL27A1-203ENST00000468565 A0A1B0GV72 72 aa10.15□□□□□ -0.79
COL27A1-203ENST00000468565 HINT1P49773 126 aaPredicted RBP10.15□□□□□ -0.79
COL27A1-203ENST00000468565 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
COL27A1-203ENST00000468565 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
COL27A1-203ENST00000468565 UBE2DNLQ8IWF7 75 aa10.14□□□□□ -0.79
COL27A1-203ENST00000468565 C11orf72Q8NBR9 251 aa10.14□□□□□ -0.79
COL27A1-203ENST00000468565 TRAV26-2A0A0B4J265 109 aa10.13□□□□□ -0.79
COL27A1-203ENST00000468565 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
COL27A1-203ENST00000468565 GNRH2O43555 120 aa10.13□□□□□ -0.79
COL27A1-203ENST00000468565 COX8AP10176 69 aa10.13□□□□□ -0.79
COL27A1-203ENST00000468565 LAGE3Q14657 143 aa10.13□□□□□ -0.79
COL27A1-203ENST00000468565 IGHV1OR15-1A0A075B7D0 117 aa10.12□□□□□ -0.79
COL27A1-203ENST00000468565 ATP5LO75964 103 aa10.12□□□□□ -0.79
COL27A1-203ENST00000468565 CFAP161Q6P656 301 aa10.12□□□□□ -0.79
COL27A1-203ENST00000468565 C18orf15Q96N68 181 aa10.12□□□□□ -0.79
COL27A1-203ENST00000468565 MUC4Q99102 2169 aa10.12□□□□□ -0.79
COL27A1-203ENST00000468565 GAGE12BA1L429 117 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 GAGE7O76087 117 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 NXPH4O95158 308 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 PPP1R17O96001 155 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 RNASE3P12724 160 aaKnown RBP10.11□□□□□ -0.79
COL27A1-203ENST00000468565 GTF2H5Q6ZYL4 71 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 MGPP08493 103 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 SMIM17P0DL12 118 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 Q6ZTI0 123 aa10.11□□□□□ -0.79
COL27A1-203ENST00000468565 C14orf178Q8N769 122 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-203ENST00000468565 PRSS1P07477 247 aa10.1□□□□□ -0.79
COL27A1-203ENST00000468565 K7EMI3 77 aa10.09□□□□□ -0.79
COL27A1-203ENST00000468565 NUDT3O95989 172 aa10.09□□□□□ -0.79
COL27A1-203ENST00000468565 DNAH2Q9P225 4427 aa10.09□□□□□ -0.79
COL27A1-203ENST00000468565 TAX1BP3O14907 124 aa10.09□□□□□ -0.79
COL27A1-203ENST00000468565 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
COL27A1-203ENST00000468565 ORMDL2Q53FV1 153 aa10.09□□□□□ -0.79
COL27A1-203ENST00000468565 RASL10AQ92737 203 aa10.09□□□□□ -0.79
COL27A1-203ENST00000468565 H3BNG1 76 aa10.08□□□□□ -0.8
COL27A1-203ENST00000468565 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
COL27A1-203ENST00000468565 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
COL27A1-203ENST00000468565 TP73-AS1Q9UF72 201 aa10.08□□□□□ -0.8
COL27A1-203ENST00000468565 TRGV2A0A075B6R0 118 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 ODF1Q14990 250 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 Q6ZR54 194 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 LINC00336Q6ZUF6 198 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 M0R2N4 97 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 CCL18P55774 89 aa10.07□□□□□ -0.8
COL27A1-203ENST00000468565 SYT8Q8NBV8 401 aa10.06□□□□□ -0.8
COL27A1-203ENST00000468565 FAT2Q9NYQ8 4349 aa10.06□□□□□ -0.8
COL27A1-203ENST00000468565 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
COL27A1-203ENST00000468565 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 DPM2O94777 84 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 IGKCP01834 107 aa10.05□□□□□ -0.8
COL27A1-203ENST00000468565 SEC11AP67812 179 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms