RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 TCAPO15273 167 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 SIVA1O15304 175 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 SNAPINO95295 136 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 NCR2O95944 276 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 RPL32P62910 135 aaKnown RBP2.41□□□□□ -2.02
TRIM59-202ENST00000468542 IQCJQ1A5X6 159 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 COX19Q49B96 90 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 FAM104BQ5XKR9 115 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 SUMO4Q6EEV6 95 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 KCNIP4Q6PIL6 250 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 LINC00336Q6ZUF6 198 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 NEXN-AS1Q8NBZ9 246 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 C20orf78Q9BR46 151 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 Q9H8V8 135 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 NIT2Q9NQR4 276 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 LAMTOR2Q9Y2Q5 125 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 TNFRSF18Q9Y5U5 241 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 HYDINQ4G0P3 5121 aa2.41□□□□□ -2.02
TRIM59-202ENST00000468542 TRBV25-1A0A075B6N4 114 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 MUC21A0A0G2JKD1 596 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 LOC100131303A0A0U1RQF7 123 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 MUC21A0A140T8X8 626 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 C7orf77A4D0Y5 90 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 GAGE12JA6NER3 117 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 H7C423 109 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 K7EMI3 77 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 MT-ND6P03923 174 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 MGPP08493 103 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 RAB4AP20338 218 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 S100PP25815 95 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 GAGE1Q13065 139 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 GAGE4Q13068 117 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 GAGE5Q13069 117 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 ELOBQ15370 118 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 GAGE13Q4V321 117 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 NFE4Q86UQ8 179 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 CLRN3Q8NCR9 226 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 RNF185Q96GF1 192 aa2.4□□□□□ -2.03
TRIM59-202ENST00000468542 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 TRAV8-3A0A0A6YYJ7 113 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 IGHV1-24A0A0C4DH33 117 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 A0A1B0GUV1 79 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 SDHAF1A6NFY7 115 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 PRSS47A8MTI9 375 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 IBA57-AS1B1ANH7 110 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 I3L3M4 83 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 VCYO14598 125 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 HLA-DQA1P01909 254 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 APOC3P02656 99 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 ZNF25P17030 456 aaPredicted RBP2.39□□□□□ -2.03
TRIM59-202ENST00000468542 CAMPP49913 170 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 POLR2KP53803 58 aaKnown RBP2.39□□□□□ -2.03
TRIM59-202ENST00000468542 SUMO2P61956 95 aaKnown RBP2.39□□□□□ -2.03
TRIM59-202ENST00000468542 COTL1Q14019 142 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 OR10J3Q5JRS4 329 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 C1orf134Q5TEV5 83 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 MRPL54Q6P161 138 aaKnown RBP2.39□□□□□ -2.03
TRIM59-202ENST00000468542 ATRAIDQ6UW56 229 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 NIT1Q86X76 327 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 WFDC10BQ8IUB3 73 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 AMN1Q8IY45 258 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 ORMDL3Q8N138 153 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 C6orf223Q8N319 242 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 NRACQ8N912 160 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 KIR2DL4Q99706 377 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 TMEM70Q9BUB7 260 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 GNB1LQ9BYB4 327 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 ST20Q9HBF5 79 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 Q9UF83 564 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 COX11Q9Y6N1 276 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 URGCP-MRPS24S4R325 110 aa2.39□□□□□ -2.03
TRIM59-202ENST00000468542 A0A087WX48 190 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 TRAV26-2A0A0B4J265 109 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 LINC01549A6NIU2 74 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 D6R8Y8 96 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 NPSP0C0P6 89 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 CKS2P33552 79 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 SSTP61278 116 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 SMAGPQ0VAQ4 97 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 Q0VG73 95 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 MRPL51Q4U2R6 128 aaKnown RBP2.38□□□□□ -2.03
TRIM59-202ENST00000468542 NTM-AS1Q6ZSK4 140 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 MRPL52Q86TS9 123 aaKnown RBP2.38□□□□□ -2.03
TRIM59-202ENST00000468542 RMI2Q96E14 147 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 TMEM243Q9BU79 118 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 SMIM2Q9BVW6 85 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 KRTAP1-5Q9BYS1 174 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 RPS10P5Q9NQ39 176 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 PRR34Q9NV39 138 aa2.38□□□□□ -2.03
TRIM59-202ENST00000468542 CSDC2Q9Y534 153 aaKnown RBP2.38□□□□□ -2.03
TRIM59-202ENST00000468542 DYNC1H1Q14204 4646 aaKnown RBP2.38□□□□□ -2.03
TRIM59-202ENST00000468542 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 IGLV2-18A0A075B6J9 118 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TRAV8-4A0A0B4J246 113 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 LINC01546A6NGU7 62 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 RTL8CO15255 209 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TNFRSF6BO95407 300 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 TSHBP01222 138 aa2.37□□□□□ -2.03
TRIM59-202ENST00000468542 APCSP02743 223 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms