RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CEBPGP53567 150 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 ELOBQ15370 118 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 TWIST1Q15672 202 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.39□□□□□ -1.23
COL4A6-205ENST00000468338 FRZBQ92765 325 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 KLK12Q9UKR0 248 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
COL4A6-205ENST00000468338 A0A0A0MQY5 61 aa7.38□□□□□ -1.23
COL4A6-205ENST00000468338 PSCAO43653 123 aa7.38□□□□□ -1.23
COL4A6-205ENST00000468338 FUSP35637 526 aaKnown RBP eCLIP7.38□□□□□ -1.23
COL4A6-205ENST00000468338 Q8N814 137 aa7.38□□□□□ -1.23
COL4A6-205ENST00000468338 NTN5Q8WTR8 489 aaPredicted RBP7.38□□□□□ -1.23
COL4A6-205ENST00000468338 TSKUQ8WUA8 353 aa7.38□□□□□ -1.23
COL4A6-205ENST00000468338 GFRA4Q9GZZ7 299 aa7.38□□□□□ -1.23
COL4A6-205ENST00000468338 COX11Q9Y6N1 276 aa7.38□□□□□ -1.23
COL4A6-205ENST00000468338 PKIAP61925 76 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 WFDC2Q14508 124 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 TMEM241Q24JQ0 296 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 GATD1Q8NB37 220 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 ISOC2Q96AB3 205 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 V9GYV3 84 aa7.37□□□□□ -1.23
COL4A6-205ENST00000468338 DNAH8Q96JB1 4490 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 CAMPP49913 170 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 RPL23P62829 140 aaKnown RBP7.36□□□□□ -1.23
COL4A6-205ENST00000468338 Q0VG73 95 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 PEA15Q15121 130 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 KCNIP4Q6PIL6 250 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 ENHOQ6UWT2 76 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 UBE2WQ96B02 151 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 RMI2Q96E14 147 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
COL4A6-205ENST00000468338 IGHV1-24A0A0C4DH33 117 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 A0A1B0GUT8 65 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 RBX1P62877 108 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 Q8N976 141 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 KRTAP4-5Q9BYR2 181 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 PCLOQ9Y6V0 5065 aa7.35□□□□□ -1.23
COL4A6-205ENST00000468338 A0A1B0GUV1 79 aa7.34□□□□□ -1.23
COL4A6-205ENST00000468338 XGP55808 180 aa7.34□□□□□ -1.23
COL4A6-205ENST00000468338 SMIM15Q7Z3B0 74 aa7.34□□□□□ -1.23
COL4A6-205ENST00000468338 C15orf54Q8N8G6 183 aa7.34□□□□□ -1.23
COL4A6-205ENST00000468338 TMEM191AQ9H0A3 160 aa7.34□□□□□ -1.23
COL4A6-205ENST00000468338 IGKV2D-24A0A075B6R9 120 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 IGLV5-52A0A0A0MRZ9 124 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 TRAV26-2A0A0B4J265 109 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 TRBV6-5A0A0K0K1A5 114 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 ANGP03950 147 aaKnown RBP7.33□□□□□ -1.24
COL4A6-205ENST00000468338 GAGE6Q13070 117 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 MIAQ16674 131 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 KRTAP26-1Q6PEX3 210 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 Q8N1X5 172 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 C20orf203Q8NBC4 194 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 NUP35Q8NFH5 326 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 BAALCQ8WXS3 180 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 RPL39LQ96EH5 51 aaKnown RBP7.33□□□□□ -1.24
COL4A6-205ENST00000468338 RNF185Q96GF1 192 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 FAT1Q14517 4588 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
COL4A6-205ENST00000468338 COTL1Q14019 142 aa7.32□□□□□ -1.24
COL4A6-205ENST00000468338 BORCS7Q96B45 105 aa7.32□□□□□ -1.24
COL4A6-205ENST00000468338 TMEM243Q9BU79 118 aa7.32□□□□□ -1.24
COL4A6-205ENST00000468338 SMIM27A0A1W2PRY6 76 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 LECT2O14960 151 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 GAS8-AS1O95177 125 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 NCR2O95944 276 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 RAB4AP20338 218 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 ADIRFQ15847 76 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 NAT8BQ9UHF3 227 aa7.31□□□□□ -1.24
COL4A6-205ENST00000468338 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
COL4A6-205ENST00000468338 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
COL4A6-205ENST00000468338 CRPP02741 224 aa7.3□□□□□ -1.24
COL4A6-205ENST00000468338 POLR2KP53803 58 aaKnown RBP7.3□□□□□ -1.24
COL4A6-205ENST00000468338 RIGQ13278 110 aa7.3□□□□□ -1.24
COL4A6-205ENST00000468338 LINC00269Q8N2A0 174 aa7.3□□□□□ -1.24
COL4A6-205ENST00000468338 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
COL4A6-205ENST00000468338 H7C423 109 aa7.29□□□□□ -1.24
COL4A6-205ENST00000468338 RPS10P46783 165 aaKnown RBP7.29□□□□□ -1.24
COL4A6-205ENST00000468338 AMTP48728 403 aa7.29□□□□□ -1.24
COL4A6-205ENST00000468338 REG3AQ06141 175 aa7.29□□□□□ -1.24
COL4A6-205ENST00000468338 Q6ZSA8 131 aa7.29□□□□□ -1.24
COL4A6-205ENST00000468338 AMN1Q8IY45 258 aa7.29□□□□□ -1.24
COL4A6-205ENST00000468338 MRAP2Q96G30 205 aa7.29□□□□□ -1.24
COL4A6-205ENST00000468338 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
COL4A6-205ENST00000468338 I3L3M4 83 aa7.28□□□□□ -1.24
COL4A6-205ENST00000468338 ESDP10768 282 aa7.28□□□□□ -1.24
COL4A6-205ENST00000468338 CLLU1Q5K131 121 aa7.28□□□□□ -1.24
COL4A6-205ENST00000468338 DEFB104AQ8WTQ1 72 aa7.28□□□□□ -1.24
COL4A6-205ENST00000468338 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.27□□□□□ -1.25
COL4A6-205ENST00000468338 TRBV27A0A0K0K1C4 114 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms