RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 HIGD1BQ9P298 99 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 PCSK5Q92824 1860 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 PRO0255Q9UI72 69 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 TNRC6BQ9UPQ9 1833 aaKnown RBP10.32□□□□□ -0.76
BRAT1-203ENST00000467558 ZNF292O60281 2723 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 F8W1H4 67 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 IFITM1P13164 125 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 AMTNQ6UX39 209 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
BRAT1-203ENST00000467558 FRYLO94915 3013 aa10.31□□□□□ -0.76
BRAT1-203ENST00000467558 NPSP0C0P6 89 aa10.31□□□□□ -0.76
BRAT1-203ENST00000467558 TTTY13Q9BZ97 58 aa10.31□□□□□ -0.76
BRAT1-203ENST00000467558 ESM1Q9NQ30 184 aa10.31□□□□□ -0.76
BRAT1-203ENST00000467558 HILS1P60008 231 aa10.31□□□□□ -0.76
BRAT1-203ENST00000467558 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
BRAT1-203ENST00000467558 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
BRAT1-203ENST00000467558 CFC1P0CG37 223 aa10.3□□□□□ -0.76
BRAT1-203ENST00000467558 Q6ZTI0 123 aa10.3□□□□□ -0.76
BRAT1-203ENST00000467558 LY6G6DO95868 133 aa10.3□□□□□ -0.76
BRAT1-203ENST00000467558 Q6ZVH6 145 aa10.3□□□□□ -0.76
BRAT1-203ENST00000467558 RAI1Q7Z5J4 1906 aaPredicted RBP10.3□□□□□ -0.76
BRAT1-203ENST00000467558 K7EP13 123 aa10.3□□□□□ -0.76
BRAT1-203ENST00000467558 MRPS12O15235 138 aaKnown RBP10.3□□□□□ -0.76
BRAT1-203ENST00000467558 SPTBN5Q9NRC6 3674 aaKnown RBP10.29□□□□□ -0.76
BRAT1-203ENST00000467558 DEFB4AO15263 64 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 IGKV2D-24A0A075B6R9 120 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 KLLNB2CW77 178 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 H3BMG7 143 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
BRAT1-203ENST00000467558 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 BRI3O95415 125 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 U3KQK5 164 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 COX7A2LO14548 114 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 GAGE2BQ13066 116 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
BRAT1-203ENST00000467558 INAFM2P0DMQ5 153 aa10.27□□□□□ -0.76
BRAT1-203ENST00000467558 RNF185Q96GF1 192 aa10.27□□□□□ -0.76
BRAT1-203ENST00000467558 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
BRAT1-203ENST00000467558 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.77
BRAT1-203ENST00000467558 DSCAML1Q8TD84 2053 aa10.27□□□□□ -0.77
BRAT1-203ENST00000467558 IGLV10-54A0A075B6I4 117 aa10.27□□□□□ -0.77
BRAT1-203ENST00000467558 P0DMU3 169 aa10.27□□□□□ -0.77
BRAT1-203ENST00000467558 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
BRAT1-203ENST00000467558 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
BRAT1-203ENST00000467558 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
BRAT1-203ENST00000467558 ZNF580Q9UK33 172 aa10.26□□□□□ -0.77
BRAT1-203ENST00000467558 CCL18P55774 89 aa10.26□□□□□ -0.77
BRAT1-203ENST00000467558 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
BRAT1-203ENST00000467558 A4D1N5 150 aa10.26□□□□□ -0.77
BRAT1-203ENST00000467558 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
BRAT1-203ENST00000467558 PRR9Q5T870 116 aa10.26□□□□□ -0.77
BRAT1-203ENST00000467558 C18orf65Q6ZTR6 163 aa10.25□□□□□ -0.77
BRAT1-203ENST00000467558 M0QY20 66 aa10.25□□□□□ -0.77
BRAT1-203ENST00000467558 FXYD2P54710 66 aa10.25□□□□□ -0.77
BRAT1-203ENST00000467558 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
BRAT1-203ENST00000467558 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
BRAT1-203ENST00000467558 Q9HAA7 133 aa10.25□□□□□ -0.77
BRAT1-203ENST00000467558 IGHV1-58A0A0C4DH39 117 aa10.24□□□□□ -0.77
BRAT1-203ENST00000467558 IGLL5B9A064 214 aa10.24□□□□□ -0.77
BRAT1-203ENST00000467558 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
BRAT1-203ENST00000467558 IGHV4-4A0A075B6R2 117 aa10.24□□□□□ -0.77
BRAT1-203ENST00000467558 MRGPRG-AS1Q2M3A8 158 aa10.24□□□□□ -0.77
BRAT1-203ENST00000467558 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
BRAT1-203ENST00000467558 BBC3Q96PG8 261 aaPredicted RBP10.24□□□□□ -0.77
BRAT1-203ENST00000467558 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 F8WEM9 126 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 FAM222AQ5U5X8 452 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 Q6ZUT4 128 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 IGHV3-30P01768 117 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 IGHV3-33P01772 117 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 IGHV3-30-3P0DP02 117 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 IGHV3-30-5P0DP03 117 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 GAGE2AQ6NT46 116 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 EDA2RQ9HAV5 297 aa10.23□□□□□ -0.77
BRAT1-203ENST00000467558 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 CCL25O15444 150 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 HIST2H2BDQ6DRA6 164 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 NEXN-AS1Q8NBZ9 246 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 GTSF1LQ9H1H1 148 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 SND1-IT1Q9HBX3 110 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 CENPEQ02224 2701 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 SOCS3O14543 225 aa10.22□□□□□ -0.77
BRAT1-203ENST00000467558 CRYBA4P53673 196 aa10.21□□□□□ -0.77
BRAT1-203ENST00000467558 CARD19Q96LW7 228 aa10.21□□□□□ -0.77
BRAT1-203ENST00000467558 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.77
BRAT1-203ENST00000467558 SHISA2Q6UWI4 295 aa10.21□□□□□ -0.78
BRAT1-203ENST00000467558 RPL32P62910 135 aaKnown RBP10.21□□□□□ -0.78
BRAT1-203ENST00000467558 NRACQ8N912 160 aa10.2□□□□□ -0.78
BRAT1-203ENST00000467558 ANKRD17O75179 2603 aaKnown RBP10.2□□□□□ -0.78
BRAT1-203ENST00000467558 ANAPC13Q9BS18 74 aa10.2□□□□□ -0.78
BRAT1-203ENST00000467558 KLK12Q9UKR0 248 aa10.2□□□□□ -0.78
BRAT1-203ENST00000467558 TINCRA0A1B0GVN0 87 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms