RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 CKS2P33552 79 aa8.06□□□□□ -1.12
SHROOM3-202ENST00000466541 RBX1P62877 108 aa8.06□□□□□ -1.12
SHROOM3-202ENST00000466541 LAGE3Q14657 143 aa8.06□□□□□ -1.12
SHROOM3-202ENST00000466541 ELOBQ15370 118 aa8.06□□□□□ -1.12
SHROOM3-202ENST00000466541 SEC11CQ9BY50 192 aa8.06□□□□□ -1.12
SHROOM3-202ENST00000466541 BIRC6Q9NR09 4857 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 A0A1B0GXF2 115 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 CRPP02741 224 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 APCSP02743 223 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 PKIAP61925 76 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 LINC00269Q8N2A0 174 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 CHCHD7Q9BUK0 85 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 TM2D2Q9BX73 214 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 TMEM242Q9NWH2 141 aa8.05□□□□□ -1.12
SHROOM3-202ENST00000466541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 D6R8Y8 96 aa8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 LECT2O14960 151 aa8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 ATP5L2Q7Z4Y8 100 aa8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 TMEM70Q9BUB7 260 aa8.04□□□□□ -1.12
SHROOM3-202ENST00000466541 A0A087WTM6 91 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 IGKV3OR2-268A0A0C4DH90 116 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 AMMECR1LQ6DCA0 310 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 ENHOQ6UWT2 76 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 NRACQ8N912 160 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 RMI2Q96E14 147 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 CTDSP1Q9GZU7 261 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
SHROOM3-202ENST00000466541 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 C7orf77A4D0Y5 90 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 VCYO14598 125 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 PPP1R17O96001 155 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 TSHBP01222 138 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 FCER1GP30273 86 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 Q0VG73 95 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 CLRN3Q8NCR9 226 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 BAALCQ8WXS3 180 aa8.02□□□□□ -1.13
SHROOM3-202ENST00000466541 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 APOC3P02656 99 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 S100PP25815 95 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 C10orf91Q5T1B1 145 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 C20orf203Q8NBC4 194 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 PKHD1P08F94 4074 aa8.01□□□□□ -1.13
SHROOM3-202ENST00000466541 DNAH11Q96DT5 4516 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 TRBV27A0A0K0K1C4 114 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 NPYP01303 97 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 HLA-DQA1P01909 254 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 ORMDL3Q8N138 153 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 MAPKAPK5-AS1Q8N8E1 139 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 PRELID3AQ96N28 172 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 IMMP2LQ96T52 175 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 KIR2DL4Q99706 377 aa8□□□□□ -1.13
SHROOM3-202ENST00000466541 CARHSP1Q9Y2V2 147 aaKnown RBP8□□□□□ -1.13
SHROOM3-202ENST00000466541 LOC389332A0A1B0GUA5 103 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 FGF6P10767 208 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 REG3AQ06141 175 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 WFDC2Q14508 124 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 NDUFA5Q16718 116 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
SHROOM3-202ENST00000466541 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 PPBPP02775 128 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 RHEBQ15382 184 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 MIAQ16674 131 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 KIAA1644Q3SXP7 199 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 C20orf78Q9BR46 151 aa7.98□□□□□ -1.13
SHROOM3-202ENST00000466541 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 TCAPO15273 167 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 ESDP10768 282 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 SLC7A5P1Q8MH63 180 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 Q8N814 137 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 SMIM2Q9BVW6 85 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 PGPEP1Q9NXJ5 209 aa7.97□□□□□ -1.13
SHROOM3-202ENST00000466541 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.14
SHROOM3-202ENST00000466541 H7C423 109 aa7.96□□□□□ -1.14
SHROOM3-202ENST00000466541 DGAT2L7PQ6IED9 249 aa7.96□□□□□ -1.14
SHROOM3-202ENST00000466541 SVBPQ8N300 66 aa7.96□□□□□ -1.14
SHROOM3-202ENST00000466541 OR5A1Q8NGJ0 315 aa7.96□□□□□ -1.14
SHROOM3-202ENST00000466541 PHOX2AO14813 284 aa7.95□□□□□ -1.14
SHROOM3-202ENST00000466541 SNAPINO95295 136 aa7.95□□□□□ -1.14
SHROOM3-202ENST00000466541 RAB5AP20339 215 aa7.95□□□□□ -1.14
SHROOM3-202ENST00000466541 MAP1LC3AQ9H492 121 aa7.95□□□□□ -1.14
SHROOM3-202ENST00000466541 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
SHROOM3-202ENST00000466541 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
SHROOM3-202ENST00000466541 RPL39P62891 51 aaKnown RBP7.94□□□□□ -1.14
SHROOM3-202ENST00000466541 RNASE13Q5GAN3 156 aaKnown RBP7.94□□□□□ -1.14
SHROOM3-202ENST00000466541 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms