RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
CXCR4-203ENST00000466288 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
CXCR4-203ENST00000466288 RIGQ13278 110 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 OR4C5Q8NGB2 326 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 BORCS7Q96B45 105 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 GATA1P15976 413 aaPredicted RBP9.47□□□□□ -0.89
CXCR4-203ENST00000466288 ZNF138P52744 262 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
CXCR4-203ENST00000466288 Q8TAT8 98 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 C12orf57Q99622 126 aa9.47□□□□□ -0.89
CXCR4-203ENST00000466288 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 A0A1B0GUT8 65 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 RAB4BP61018 213 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 LELP1Q5T871 98 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 Q8N3U1 123 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 GTSF1Q8WW33 167 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 HIST1H2BLQ99880 126 aa9.46□□□□□ -0.9
CXCR4-203ENST00000466288 IFITM10A6NMD0 228 aa9.45□□□□□ -0.9
CXCR4-203ENST00000466288 CRIP1P50238 77 aa9.45□□□□□ -0.9
CXCR4-203ENST00000466288 S100A12P80511 92 aa9.45□□□□□ -0.9
CXCR4-203ENST00000466288 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
CXCR4-203ENST00000466288 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
CXCR4-203ENST00000466288 SH2D1AO60880 128 aa9.44□□□□□ -0.9
CXCR4-203ENST00000466288 SLC25A29Q8N8R3 303 aa9.44□□□□□ -0.9
CXCR4-203ENST00000466288 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 F2Z2F3 143 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 M0R2P5 195 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 FABP4P15090 132 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 FAM159AQ6UWV7 190 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 OR10D4PQ8NGN7 298 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
CXCR4-203ENST00000466288 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
CXCR4-203ENST00000466288 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
CXCR4-203ENST00000466288 CTRLP40313 264 aa9.41□□□□□ -0.9
CXCR4-203ENST00000466288 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
CXCR4-203ENST00000466288 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
CXCR4-203ENST00000466288 GNRH2O43555 120 aa9.4□□□□□ -0.9
CXCR4-203ENST00000466288 CAMPP49913 170 aa9.4□□□□□ -0.9
CXCR4-203ENST00000466288 JOSD1Q15040 202 aaPredicted RBP9.4□□□□□ -0.9
CXCR4-203ENST00000466288 DAZ4Q86SG3 579 aaKnown RBP9.4□□□□□ -0.9
CXCR4-203ENST00000466288 Q8N976 141 aa9.4□□□□□ -0.9
CXCR4-203ENST00000466288 DAZ3Q9NR90 486 aaKnown RBP9.4□□□□□ -0.9
CXCR4-203ENST00000466288 TRBV6-4A0A1B0GX49 114 aa9.4□□□□□ -0.91
CXCR4-203ENST00000466288 IGLC6P0CF74 106 aa9.4□□□□□ -0.91
CXCR4-203ENST00000466288 RHOHQ15669 191 aa9.4□□□□□ -0.91
CXCR4-203ENST00000466288 FER1L6-AS1Q8NA97 138 aa9.4□□□□□ -0.91
CXCR4-203ENST00000466288 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.91
CXCR4-203ENST00000466288 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.91
CXCR4-203ENST00000466288 RAB4AP20338 218 aa9.39□□□□□ -0.91
CXCR4-203ENST00000466288 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
CXCR4-203ENST00000466288 ATP6V0E2Q8NHE4 81 aa9.39□□□□□ -0.91
CXCR4-203ENST00000466288 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
CXCR4-203ENST00000466288 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
CXCR4-203ENST00000466288 TRAV21A0A0B4J279 112 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 GRIFINA4D1Z8 144 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 SERF1AO75920 110 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 PYY3Q5JQD4 70 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 KCNS1Q96KK3 526 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 DNAJC30Q96LL9 226 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 NIT2Q9NQR4 276 aa9.38□□□□□ -0.91
CXCR4-203ENST00000466288 ARMS2P0C7Q2 107 aa9.37□□□□□ -0.91
CXCR4-203ENST00000466288 PMCHP20382 165 aa9.37□□□□□ -0.91
CXCR4-203ENST00000466288 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
CXCR4-203ENST00000466288 CFAP126Q5VTH2 177 aa9.37□□□□□ -0.91
CXCR4-203ENST00000466288 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
CXCR4-203ENST00000466288 CHCHD1Q96BP2 118 aaKnown RBP9.37□□□□□ -0.91
CXCR4-203ENST00000466288 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 OR5AL1P0C617 328 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 GZMBP10144 247 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 CACNG7P62955 275 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
CXCR4-203ENST00000466288 SAMD10Q9BYL1 202 aa9.36□□□□□ -0.91
CXCR4-203ENST00000466288 CIDEAO60543 219 aa9.35□□□□□ -0.91
CXCR4-203ENST00000466288 PPBPP02775 128 aa9.35□□□□□ -0.91
CXCR4-203ENST00000466288 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
CXCR4-203ENST00000466288 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
CXCR4-203ENST00000466288 ASIPP42127 132 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 LINC00310P59036 64 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 Q6ZRU5 148 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 SNAI2O43623 268 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 RMI2Q96E14 147 aa9.34□□□□□ -0.91
CXCR4-203ENST00000466288 IGKV3D-20A0A0C4DH25 116 aa9.33□□□□□ -0.92
CXCR4-203ENST00000466288 HSBP1O75506 76 aa9.33□□□□□ -0.92
CXCR4-203ENST00000466288 LINC00694P0DN24 101 aa9.33□□□□□ -0.92
CXCR4-203ENST00000466288 NUPR1O60356 82 aa9.32□□□□□ -0.92
CXCR4-203ENST00000466288 NTF3P20783 257 aa9.32□□□□□ -0.92
CXCR4-203ENST00000466288 AMTP48728 403 aa9.32□□□□□ -0.92
CXCR4-203ENST00000466288 TWIST1Q15672 202 aa9.32□□□□□ -0.92
CXCR4-203ENST00000466288 ORMDL3Q8N138 153 aa9.32□□□□□ -0.92
CXCR4-203ENST00000466288 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms