RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-208	ENST00000466101	TRBV6-5	A0A0K0K1A5	114 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101		A0A1B0GW15	77 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	UBE2L6	O14933	153 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	PMCH	P20382	165 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	HBB	P68871	147 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	MRPL51	Q4U2R6	128 aa	Known RBP	11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	FAM104B	Q5XKR9	115 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	CLPSL2	Q6UWE3	100 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101	ENHO	Q6UWT2	76 aa		11.25	□□□□□ -0.61
CCNL1-208	ENST00000466101		A0A1B0GXF2	115 aa		11.24	□□□□□ -0.61
CCNL1-208	ENST00000466101	LRCOL1	A6NCL2	159 aa		11.24	□□□□□ -0.61
CCNL1-208	ENST00000466101	CRP	P02741	224 aa		11.24	□□□□□ -0.61
CCNL1-208	ENST00000466101		I3L3M4	83 aa		11.23	□□□□□ -0.61
CCNL1-208	ENST00000466101	LECT2	O14960	151 aa		11.23	□□□□□ -0.61
CCNL1-208	ENST00000466101	APCS	P02743	223 aa		11.23	□□□□□ -0.61
CCNL1-208	ENST00000466101	S100A8	P05109	93 aa		11.23	□□□□□ -0.61
CCNL1-208	ENST00000466101	RMI2	Q96E14	147 aa		11.23	□□□□□ -0.61
CCNL1-208	ENST00000466101	TMEM70	Q9BUB7	260 aa		11.23	□□□□□ -0.61
CCNL1-208	ENST00000466101	IGLV4-60	A0A075B6I1	120 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	LINC00862	A6NCI5	91 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101		Q0VG73	95 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	WFDC2	Q14508	124 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	LINC00269	Q8N2A0	174 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	MAPKAPK5-AS1	Q8N8E1	139 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	NRAC	Q8N912	160 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	TMEM242	Q9NWH2	141 aa		11.22	□□□□□ -0.61
CCNL1-208	ENST00000466101	PKHD1	P08F94	4074 aa		11.21	□□□□□ -0.61
CCNL1-208	ENST00000466101	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.21	□□□□□ -0.61
CCNL1-208	ENST00000466101	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.21	□□□□□ -0.61
CCNL1-208	ENST00000466101	C20orf203	Q8NBC4	194 aa		11.21	□□□□□ -0.61
CCNL1-208	ENST00000466101	BAALC	Q8WXS3	180 aa		11.21	□□□□□ -0.61
CCNL1-208	ENST00000466101	SEC11C	Q9BY50	192 aa		11.21	□□□□□ -0.61
CCNL1-208	ENST00000466101	DNAH11	Q96DT5	4516 aa		11.21	□□□□□ -0.62
CCNL1-208	ENST00000466101	TSHB	P01222	138 aa		11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101	CKS2	P33552	79 aa		11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101	POLR2K	P53803	58 aa	Known RBP	11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101	ATP5L2	Q7Z4Y8	100 aa		11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101	C1orf43	Q9BWL3	253 aa		11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101	PGPEP1	Q9NXJ5	209 aa		11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101	COX11	Q9Y6N1	276 aa		11.2	□□□□□ -0.62
CCNL1-208	ENST00000466101		D6R8Y8	96 aa		11.19	□□□□□ -0.62
CCNL1-208	ENST00000466101		Q8N814	137 aa		11.19	□□□□□ -0.62
CCNL1-208	ENST00000466101	TRBV27	A0A0K0K1C4	114 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101		A0A1B0GUV1	79 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	PPP1R17	O96001	155 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	SUMO2	P61956	95 aa	Known RBP	11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	REG3A	Q06141	175 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	MIA	Q16674	131 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	AMMECR1L	Q6DCA0	310 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	RNASEK	Q6P5S7	137 aa	Known RBP	11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	PRR34	Q9NV39	138 aa		11.18	□□□□□ -0.62
CCNL1-208	ENST00000466101	VCY	O14598	125 aa		11.17	□□□□□ -0.62
CCNL1-208	ENST00000466101	BTF3L4	Q96K17	158 aa		11.17	□□□□□ -0.62
CCNL1-208	ENST00000466101	IGLV10-54	A0A075B6I4	117 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	IGKV3OR2-268	A0A0C4DH90	116 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	TNFRSF6B	O95407	300 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	HLA-DQA1	P01909	254 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	FGF6	P10767	208 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	FCER1G	P30273	86 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	CDPF1	Q6NVV7	123 aa		11.16	□□□□□ -0.62
CCNL1-208	ENST00000466101	DYNC1H1	Q14204	4646 aa	Known RBP	11.15	□□□□□ -0.62
CCNL1-208	ENST00000466101	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.15	□□□□□ -0.62
CCNL1-208	ENST00000466101	IGLV5-52	A0A0A0MRZ9	124 aa		11.15	□□□□□ -0.62
CCNL1-208	ENST00000466101	NPY	P01303	97 aa		11.15	□□□□□ -0.62
CCNL1-208	ENST00000466101	ESD	P10768	282 aa		11.15	□□□□□ -0.62
CCNL1-208	ENST00000466101	CTDSP1	Q9GZU7	261 aa		11.15	□□□□□ -0.62
CCNL1-208	ENST00000466101		H7C423	109 aa		11.14	□□□□□ -0.63
CCNL1-208	ENST00000466101	C10orf91	Q5T1B1	145 aa		11.14	□□□□□ -0.63
CCNL1-208	ENST00000466101	IMMP2L	Q96T52	175 aa		11.14	□□□□□ -0.63
CCNL1-208	ENST00000466101	KIR2DL4	Q99706	377 aa		11.14	□□□□□ -0.63
CCNL1-208	ENST00000466101	C20orf78	Q9BR46	151 aa		11.14	□□□□□ -0.63
CCNL1-208	ENST00000466101	TRBV24-1	A0A075B6N3	115 aa		11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	C7orf77	A4D0Y5	90 aa		11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	PPBP	P02775	128 aa		11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	TMEM136	Q6ZRR5	245 aa		11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	ORMDL3	Q8N138	153 aa		11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	PRELID3A	Q96N28	172 aa		11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.13	□□□□□ -0.63
CCNL1-208	ENST00000466101	KRTAP10-1	P60331	282 aa		11.12	□□□□□ -0.63
CCNL1-208	ENST00000466101	CLRN3	Q8NCR9	226 aa		11.12	□□□□□ -0.63
CCNL1-208	ENST00000466101	NTN5	Q8WTR8	489 aa	Predicted RBP	11.12	□□□□□ -0.63
CCNL1-208	ENST00000466101	TMEM101	Q96IK0	257 aa		11.12	□□□□□ -0.63
CCNL1-208	ENST00000466101	SMIM2	Q9BVW6	85 aa		11.12	□□□□□ -0.63
CCNL1-208	ENST00000466101	RPS10P5	Q9NQ39	176 aa		11.12	□□□□□ -0.63
CCNL1-208	ENST00000466101	GCSH	P23434	173 aa		11.11	□□□□□ -0.63
CCNL1-208	ENST00000466101	KRTAP26-1	Q6PEX3	210 aa		11.11	□□□□□ -0.63
CCNL1-208	ENST00000466101	KIAA1109	Q2LD37	5005 aa		11.1	□□□□□ -0.63
CCNL1-208	ENST00000466101	USP17L23	D6RBM5	183 aa		11.1	□□□□□ -0.63
CCNL1-208	ENST00000466101	PHOX2A	O14813	284 aa		11.1	□□□□□ -0.63
CCNL1-208	ENST00000466101	ZNF25	P17030	456 aa	Predicted RBP	11.1	□□□□□ -0.63
CCNL1-208	ENST00000466101	S100P	P25815	95 aa		11.1	□□□□□ -0.63
CCNL1-208	ENST00000466101	OR5A1	Q8NGJ0	315 aa		11.1	□□□□□ -0.63
CCNL1-208	ENST00000466101	TRAV8-4	A0A0B4J246	113 aa		11.09	□□□□□ -0.63
CCNL1-208	ENST00000466101	TCAP	O15273	167 aa		11.09	□□□□□ -0.63
CCNL1-208	ENST00000466101	APOC3	P02656	99 aa		11.09	□□□□□ -0.63
CCNL1-208	ENST00000466101	RPL32	P62910	135 aa	Known RBP	11.09	□□□□□ -0.63
CCNL1-208	ENST00000466101	LOC389332	A0A1B0GUA5	103 aa		11.08	□□□□□ -0.64
CCNL1-208	ENST00000466101	CDK2AP2	O75956	126 aa		11.08	□□□□□ -0.64
CCNL1-208	ENST00000466101	RHEB	Q15382	184 aa		11.08	□□□□□ -0.64
CCNL1-208	ENST00000466101	DNAH5	Q8TE73	4624 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms