RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 A6NDX4 124 aa14.48□□□□□ -0.09
SDF4-205ENST00000465727 MEIG1Q5JSS6 88 aa14.48□□□□□ -0.09
SDF4-205ENST00000465727 PRORYQ9H606 182 aa14.48□□□□□ -0.09
SDF4-205ENST00000465727 UBTD1Q9HAC8 227 aa14.48□□□□□ -0.09
SDF4-205ENST00000465727 BRD3OSQ6XYD6 125 aa14.47□□□□□ -0.09
SDF4-205ENST00000465727 DUX3Q96PT4 197 aa14.47□□□□□ -0.09
SDF4-205ENST00000465727 EDN2P20800 178 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 SMIM20Q8N5G0 67 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 IGSF10Q6WRI0 2623 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 CFHR3Q02985 330 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 LY6EQ16553 131 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 SPINK13Q1W4C9 94 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 TMEM126AQ9H061 195 aa14.46□□□□□ -0.09
SDF4-205ENST00000465727 K7EQG2 157 aa14.45□□□□□ -0.1
SDF4-205ENST00000465727 TNFRSF18Q9Y5U5 241 aa14.45□□□□□ -0.1
SDF4-205ENST00000465727 IGKV3-20P01619 116 aa14.45□□□□□ -0.1
SDF4-205ENST00000465727 ASH1LQ9NR48 2969 aaKnown RBP14.44□□□□□ -0.1
SDF4-205ENST00000465727 H3BUX3 64 aa14.44□□□□□ -0.1
SDF4-205ENST00000465727 UBE2D4Q9Y2X8 147 aa14.44□□□□□ -0.1
SDF4-205ENST00000465727 NDUFA1O15239 70 aa14.43□□□□□ -0.1
SDF4-205ENST00000465727 Q6ZSV7 163 aa14.43□□□□□ -0.1
SDF4-205ENST00000465727 BLCAPP62952 87 aa14.43□□□□□ -0.1
SDF4-205ENST00000465727 CIRBPQ14011 172 aaKnown RBP14.43□□□□□ -0.1
SDF4-205ENST00000465727 CEMP1Q6PRD7 247 aaPredicted RBP14.43□□□□□ -0.1
SDF4-205ENST00000465727 SVEP1Q4LDE5 3571 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 UCNP55089 124 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 NPC2P61916 151 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 HERV-K104P63124 156 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 KLRB1Q12918 225 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 PIK3CD-AS1Q5SR53 167 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 COPS9Q8WXC6 57 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 BBC3Q96PG8 261 aaPredicted RBP14.42□□□□□ -0.1
SDF4-205ENST00000465727 CHCHD7Q9BUK0 85 aa14.42□□□□□ -0.1
SDF4-205ENST00000465727 CHCHD5Q9BSY4 110 aa14.41□□□□□ -0.1
SDF4-205ENST00000465727 TIRAPP58753 221 aa14.4□□□□□ -0.1
SDF4-205ENST00000465727 SPTA1P02549 2419 aa14.4□□□□□ -0.1
SDF4-205ENST00000465727 IGLV5-45A0A087WSX0 123 aa14.4□□□□□ -0.1
SDF4-205ENST00000465727 COX7A2LO14548 114 aa14.4□□□□□ -0.1
SDF4-205ENST00000465727 RNASE13Q5GAN3 156 aaKnown RBP14.4□□□□□ -0.1
SDF4-205ENST00000465727 A8MZ25 164 aa14.39□□□□□ -0.11
SDF4-205ENST00000465727 CFAP161Q6P656 301 aa14.39□□□□□ -0.11
SDF4-205ENST00000465727 CITED2Q99967 270 aaPredicted RBP14.39□□□□□ -0.11
SDF4-205ENST00000465727 LY6DQ14210 128 aa14.38□□□□□ -0.11
SDF4-205ENST00000465727 IGHV4-38-2P0DP08 117 aa14.38□□□□□ -0.11
SDF4-205ENST00000465727 PSMB8P28062 276 aa14.38□□□□□ -0.11
SDF4-205ENST00000465727 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
SDF4-205ENST00000465727 LINC00643Q86TS7 51 aa14.37□□□□□ -0.11
SDF4-205ENST00000465727 LINC01587Q99440 93 aa14.37□□□□□ -0.11
SDF4-205ENST00000465727 ATP5G1P05496 136 aa14.37□□□□□ -0.11
SDF4-205ENST00000465727 SHISA2Q6UWI4 295 aa14.37□□□□□ -0.11
SDF4-205ENST00000465727 IGHV3-73A0A0B4J1V6 119 aa14.36□□□□□ -0.11
SDF4-205ENST00000465727 FAM236AA0A1B0GUQ0 79 aa14.36□□□□□ -0.11
SDF4-205ENST00000465727 FAM236BA0A1B0GV22 79 aa14.36□□□□□ -0.11
SDF4-205ENST00000465727 LINC00308Q8TCZ7 52 aa14.36□□□□□ -0.11
SDF4-205ENST00000465727 DNAJC30Q96LL9 226 aa14.36□□□□□ -0.11
SDF4-205ENST00000465727 TMEM89A2RUT3 159 aa14.35□□□□□ -0.11
SDF4-205ENST00000465727 CDKN2A-AS1Q9UH64 79 aa14.35□□□□□ -0.11
SDF4-205ENST00000465727 ATRXP46100 2492 aa14.35□□□□□ -0.11
SDF4-205ENST00000465727 TRACP01848 142 aa14.35□□□□□ -0.11
SDF4-205ENST00000465727 PROK1P58294 105 aa14.35□□□□□ -0.11
SDF4-205ENST00000465727 SDIM1Q6ZPB5 146 aa14.34□□□□□ -0.11
SDF4-205ENST00000465727 RELNP78509 3460 aa14.34□□□□□ -0.11
SDF4-205ENST00000465727 DOPEY2Q9Y3R5 2298 aa14.34□□□□□ -0.11
SDF4-205ENST00000465727 COL6A6A6NMZ7 2263 aa14.34□□□□□ -0.11
SDF4-205ENST00000465727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.34□□□□□ -0.11
SDF4-205ENST00000465727 IGKV2-29A2NJV5 120 aaPredicted RBP14.34□□□□□ -0.11
SDF4-205ENST00000465727 DAND5Q8N907 189 aa14.34□□□□□ -0.11
SDF4-205ENST00000465727 LINC00467Q9BRT7 94 aa14.34□□□□□ -0.11
SDF4-205ENST00000465727 IGLV5-39A0A0G2JS06 123 aa14.33□□□□□ -0.12
SDF4-205ENST00000465727 PIMREGQ9BSJ6 248 aa14.33□□□□□ -0.12
SDF4-205ENST00000465727 RBMY1A1P0DJD3 496 aaKnown RBP14.32□□□□□ -0.12
SDF4-205ENST00000465727 RBMY1CP0DJD4 496 aa14.32□□□□□ -0.12
SDF4-205ENST00000465727 RBMY1FQ15415 496 aaKnown RBP14.32□□□□□ -0.12
SDF4-205ENST00000465727 PPDPFQ9H3Y8 114 aa14.32□□□□□ -0.12
SDF4-205ENST00000465727 NACAE9PAV3 2078 aa14.32□□□□□ -0.12
SDF4-205ENST00000465727 PRB1P04280 392 aa14.32□□□□□ -0.12
SDF4-205ENST00000465727 HERVK_113P63121 156 aa14.32□□□□□ -0.12
SDF4-205ENST00000465727 CXCL5P42830 114 aa14.31□□□□□ -0.12
SDF4-205ENST00000465727 ZNF415Q09FC8 603 aa14.31□□□□□ -0.12
SDF4-205ENST00000465727 FAM222AQ5U5X8 452 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 DUX5Q96PT3 197 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 Q9H8V8 135 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 IGHV4-61A0A0C4DH41 118 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 A8MTW9 85 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 IGHV3-53P01767 116 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 PEMTQ9UBM1 199 aa14.3□□□□□ -0.12
SDF4-205ENST00000465727 NBASA2RRP1 2371 aa14.29□□□□□ -0.12
SDF4-205ENST00000465727 C3orf22Q8N5N4 141 aa14.29□□□□□ -0.12
SDF4-205ENST00000465727 UQCRQO14949 82 aa14.29□□□□□ -0.12
SDF4-205ENST00000465727 DAZ2Q13117 558 aaKnown RBP14.29□□□□□ -0.12
SDF4-205ENST00000465727 BEAN1Q3B7T3 259 aa14.29□□□□□ -0.12
SDF4-205ENST00000465727 FAM19A3Q7Z5A8 133 aa14.29□□□□□ -0.12
SDF4-205ENST00000465727 DAZ4Q86SG3 579 aaKnown RBP14.29□□□□□ -0.12
SDF4-205ENST00000465727 SMCR5Q8TEV8 140 aa14.29□□□□□ -0.12
SDF4-205ENST00000465727 DAZ3Q9NR90 486 aaKnown RBP14.29□□□□□ -0.12
SDF4-205ENST00000465727 ZFHX3Q15911 3703 aa14.28□□□□□ -0.12
SDF4-205ENST00000465727 SPTAN1Q13813 2472 aaKnown RBP14.28□□□□□ -0.12
SDF4-205ENST00000465727 CFAP46Q8IYW2 2715 aa14.28□□□□□ -0.12
SDF4-205ENST00000465727 INAFM2P0DMQ5 153 aa14.28□□□□□ -0.12
SDF4-205ENST00000465727 HTN1P15515 57 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms