RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SUMO2P61956 95 aaKnown RBP11.99□□□□□ -0.49
CPSF4-209ENST00000465132 FABP9Q0Z7S8 132 aa11.99□□□□□ -0.49
CPSF4-209ENST00000465132 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
CPSF4-209ENST00000465132 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
CPSF4-209ENST00000465132 K7EP13 123 aa11.98□□□□□ -0.49
CPSF4-209ENST00000465132 TNFRSF6BO95407 300 aa11.98□□□□□ -0.49
CPSF4-209ENST00000465132 RPL32P62910 135 aaKnown RBP11.98□□□□□ -0.49
CPSF4-209ENST00000465132 RPL39LQ96EH5 51 aaKnown RBP11.98□□□□□ -0.49
CPSF4-209ENST00000465132 KRTAP4-5Q9BYR2 181 aa11.98□□□□□ -0.49
CPSF4-209ENST00000465132 MRPL18Q9H0U6 180 aaKnown RBP11.98□□□□□ -0.49
CPSF4-209ENST00000465132 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
CPSF4-209ENST00000465132 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
CPSF4-209ENST00000465132 LINC00588Q9Y4M8 146 aa11.97□□□□□ -0.49
CPSF4-209ENST00000465132 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 TRBV27A0A0K0K1C4 114 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 SMKR1H3BMG3 65 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 SMAGPQ0VAQ4 97 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 NRACQ8N912 160 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 YPEL4Q96NS1 127 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 TMEM70Q9BUB7 260 aa11.96□□□□□ -0.49
CPSF4-209ENST00000465132 FCER1GP30273 86 aa11.95□□□□□ -0.5
CPSF4-209ENST00000465132 TNP2Q05952 138 aa11.95□□□□□ -0.5
CPSF4-209ENST00000465132 Q9UF83 564 aa11.95□□□□□ -0.5
CPSF4-209ENST00000465132 NBDYA0A0U1RRE5 68 aa11.94□□□□□ -0.5
CPSF4-209ENST00000465132 K7EMI3 77 aa11.94□□□□□ -0.5
CPSF4-209ENST00000465132 SIVA1O15304 175 aa11.94□□□□□ -0.5
CPSF4-209ENST00000465132 RAB5AP20339 215 aa11.94□□□□□ -0.5
CPSF4-209ENST00000465132 RPS10P46783 165 aaKnown RBP11.94□□□□□ -0.5
CPSF4-209ENST00000465132 POLR2KP53803 58 aaKnown RBP11.94□□□□□ -0.5
CPSF4-209ENST00000465132 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
CPSF4-209ENST00000465132 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 UBE2L6O14933 153 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 G0S2P27469 103 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 AMTP48728 403 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 IQCJQ1A5X6 159 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 TMEM18Q96B42 140 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 SMIM2Q9BVW6 85 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 Q9H8V8 135 aa11.93□□□□□ -0.5
CPSF4-209ENST00000465132 NXT2Q9NPJ8 142 aaKnown RBP11.93□□□□□ -0.5
CPSF4-209ENST00000465132 C16orf90A8MZG2 172 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 H7C423 109 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 NPYP01303 97 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 CHCHD5Q9BSY4 110 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 TMEM243Q9BU79 118 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 HSPG2P98160 4391 aa11.92□□□□□ -0.5
CPSF4-209ENST00000465132 A0A087WX48 190 aa11.91□□□□□ -0.5
CPSF4-209ENST00000465132 COLCA2A8K830 154 aa11.9□□□□□ -0.5
CPSF4-209ENST00000465132 CDK2AP2O75956 126 aa11.9□□□□□ -0.5
CPSF4-209ENST00000465132 GAS8-AS1O95177 125 aa11.9□□□□□ -0.5
CPSF4-209ENST00000465132 KIAA1644Q3SXP7 199 aa11.9□□□□□ -0.5
CPSF4-209ENST00000465132 ALKBH7Q9BT30 221 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-209ENST00000465132 Q8N8P6 123 aa11.89□□□□□ -0.51
CPSF4-209ENST00000465132 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
CPSF4-209ENST00000465132 TMEM262E9PQX1 116 aa11.88□□□□□ -0.51
CPSF4-209ENST00000465132 DNAH10OSP0CZ25 163 aa11.88□□□□□ -0.51
CPSF4-209ENST00000465132 BTF3P20290 206 aaKnown RBP11.88□□□□□ -0.51
CPSF4-209ENST00000465132 RAB5BP61020 215 aa11.88□□□□□ -0.51
CPSF4-209ENST00000465132 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
CPSF4-209ENST00000465132 LINC01556Q5JQF7 62 aa11.88□□□□□ -0.51
CPSF4-209ENST00000465132 LRP1BQ9NZR2 4599 aa11.87□□□□□ -0.51
CPSF4-209ENST00000465132 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
CPSF4-209ENST00000465132 SCO1O75880 301 aa11.87□□□□□ -0.51
CPSF4-209ENST00000465132 TSHBP01222 138 aa11.87□□□□□ -0.51
CPSF4-209ENST00000465132 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
CPSF4-209ENST00000465132 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
CPSF4-209ENST00000465132 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
CPSF4-209ENST00000465132 NIT1Q86X76 327 aa11.86□□□□□ -0.51
CPSF4-209ENST00000465132 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
CPSF4-209ENST00000465132 TMEM101Q96IK0 257 aa11.86□□□□□ -0.51
CPSF4-209ENST00000465132 ZNF25P17030 456 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-209ENST00000465132 FA2HQ7L5A8 372 aa11.85□□□□□ -0.51
CPSF4-209ENST00000465132 MAPKAPK5-AS1Q8N8E1 139 aa11.85□□□□□ -0.51
CPSF4-209ENST00000465132 A0A1B0GUV1 79 aa11.84□□□□□ -0.51
CPSF4-209ENST00000465132 LAGE3Q14657 143 aa11.84□□□□□ -0.51
CPSF4-209ENST00000465132 TRGC2P03986 189 aa11.83□□□□□ -0.52
CPSF4-209ENST00000465132 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
CPSF4-209ENST00000465132 ESDP10768 282 aa11.82□□□□□ -0.52
CPSF4-209ENST00000465132 IFI27P40305 119 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-209ENST00000465132 KRTAP1-5Q9BYS1 174 aa11.82□□□□□ -0.52
CPSF4-209ENST00000465132 GAGE6Q13070 117 aa11.81□□□□□ -0.52
CPSF4-209ENST00000465132 SPATA12Q7Z6I5 190 aa11.81□□□□□ -0.52
CPSF4-209ENST00000465132 NFE4Q86UQ8 179 aa11.81□□□□□ -0.52
CPSF4-209ENST00000465132 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
CPSF4-209ENST00000465132 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
CPSF4-209ENST00000465132 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
CPSF4-209ENST00000465132 TRAV8-3A0A0A6YYJ7 113 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 IGHV3-30P01768 117 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 IGHV3-33P01772 117 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 CRPP02741 224 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 IGHV3-30-3P0DP02 117 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 IGHV3-30-5P0DP03 117 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 Q0VG73 95 aa11.8□□□□□ -0.52
CPSF4-209ENST00000465132 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
CPSF4-209ENST00000465132 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms