RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 SAMD10Q9BYL1 202 aa9.45□□□□□ -0.9
SNX12-203ENST00000465030 RNASE7Q9H1E1 156 aaKnown RBP9.45□□□□□ -0.9
SNX12-203ENST00000465030 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
SNX12-203ENST00000465030 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.44□□□□□ -0.9
SNX12-203ENST00000465030 RHODO00212 210 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 IGLC6P0CF74 106 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 CACNG7P62955 275 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 GAGE1Q13065 139 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 GAGE4Q13068 117 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 GAGE5Q13069 117 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 ENHOQ6UWT2 76 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 FER1L6-AS1Q8NA97 138 aa9.44□□□□□ -0.9
SNX12-203ENST00000465030 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
SNX12-203ENST00000465030 MUC21A0A0G2JKD1 596 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 MUC21A0A140T8X8 626 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 IFITM2Q01629 132 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 SPANXN1Q5VSR9 72 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 LINC01551Q86U37 167 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 TPPP3Q9BW30 176 aa9.43□□□□□ -0.9
SNX12-203ENST00000465030 A0A087WWL8 130 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 CRPP02741 224 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 CLLU1Q5K131 121 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 FAM231DQ6ZW35 169 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
SNX12-203ENST00000465030 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
SNX12-203ENST00000465030 SSTP61278 116 aa9.41□□□□□ -0.9
SNX12-203ENST00000465030 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
SNX12-203ENST00000465030 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
SNX12-203ENST00000465030 F2Z2F3 143 aa9.4□□□□□ -0.9
SNX12-203ENST00000465030 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
SNX12-203ENST00000465030 Q6ZRP5 223 aa9.4□□□□□ -0.9
SNX12-203ENST00000465030 NAT8Q9UHE5 227 aa9.4□□□□□ -0.9
SNX12-203ENST00000465030 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
SNX12-203ENST00000465030 CTRLP40313 264 aa9.39□□□□□ -0.91
SNX12-203ENST00000465030 MAJINQ3KP22 176 aa9.39□□□□□ -0.91
SNX12-203ENST00000465030 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
SNX12-203ENST00000465030 AP1S3Q96PC3 154 aa9.39□□□□□ -0.91
SNX12-203ENST00000465030 A8MWL6 223 aa9.38□□□□□ -0.91
SNX12-203ENST00000465030 LINC01547P58512 204 aaPredicted RBP9.38□□□□□ -0.91
SNX12-203ENST00000465030 RPL23P62829 140 aaKnown RBP9.38□□□□□ -0.91
SNX12-203ENST00000465030 ADIRFQ15847 76 aa9.38□□□□□ -0.91
SNX12-203ENST00000465030 CT83Q5H943 113 aa9.38□□□□□ -0.91
SNX12-203ENST00000465030 STPG4Q8N801 248 aa9.38□□□□□ -0.91
SNX12-203ENST00000465030 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
SNX12-203ENST00000465030 OSTCQ9NRP0 149 aa9.38□□□□□ -0.91
SNX12-203ENST00000465030 hDV102S1A0JD36 115 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 SLPIP03973 132 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 SMIM17P0DL12 118 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 RAB4BP61018 213 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 ZNF56Q15929 161 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 C15orf54Q8N8G6 183 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 Q9UF83 564 aa9.37□□□□□ -0.91
SNX12-203ENST00000465030 MIAQ16674 131 aa9.36□□□□□ -0.91
SNX12-203ENST00000465030 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
SNX12-203ENST00000465030 TRGC1P0CF51 173 aa9.35□□□□□ -0.91
SNX12-203ENST00000465030 NTF3P20783 257 aa9.35□□□□□ -0.91
SNX12-203ENST00000465030 COX6A2Q02221 97 aa9.35□□□□□ -0.91
SNX12-203ENST00000465030 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
SNX12-203ENST00000465030 TSKUQ8WUA8 353 aa9.35□□□□□ -0.91
SNX12-203ENST00000465030 V9GYV3 84 aa9.35□□□□□ -0.91
SNX12-203ENST00000465030 IGKV2-24A0A0C4DH68 120 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 F5H697 171 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 MGPP08493 103 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 TWIST1Q15672 202 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 PGLYRP4Q96LB8 373 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
SNX12-203ENST00000465030 FOXA3P55318 350 aaPredicted RBP9.33□□□□□ -0.92
SNX12-203ENST00000465030 HIGD1CA8MV81 97 aa9.32□□□□□ -0.92
SNX12-203ENST00000465030 ANGP03950 147 aaKnown RBP9.32□□□□□ -0.92
SNX12-203ENST00000465030 RPL36AP83881 106 aaKnown RBP9.32□□□□□ -0.92
SNX12-203ENST00000465030 RPL36ALQ969Q0 106 aaKnown RBP9.32□□□□□ -0.92
SNX12-203ENST00000465030 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
SNX12-203ENST00000465030 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
SNX12-203ENST00000465030 TMEM262E9PQX1 116 aa9.31□□□□□ -0.92
SNX12-203ENST00000465030 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
SNX12-203ENST00000465030 UQCC3Q6UW78 93 aa9.31□□□□□ -0.92
SNX12-203ENST00000465030 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
SNX12-203ENST00000465030 UBE2D3P61077 147 aa9.3□□□□□ -0.92
SNX12-203ENST00000465030 UBE2D2P62837 147 aa9.3□□□□□ -0.92
SNX12-203ENST00000465030 MPV17L2Q567V2 206 aa9.3□□□□□ -0.92
SNX12-203ENST00000465030 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
SNX12-203ENST00000465030 A0A1B0GUT8 65 aa9.29□□□□□ -0.92
SNX12-203ENST00000465030 M0QY20 66 aa9.29□□□□□ -0.92
SNX12-203ENST00000465030 PNRC1Q12796 327 aaPredicted RBP9.29□□□□□ -0.92
SNX12-203ENST00000465030 COMMD7Q86VX2 200 aa9.29□□□□□ -0.92
SNX12-203ENST00000465030 NUP35Q8NFH5 326 aa9.29□□□□□ -0.92
SNX12-203ENST00000465030 PRSS3P2Q8NHM4 247 aa9.29□□□□□ -0.92
SNX12-203ENST00000465030 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
SNX12-203ENST00000465030 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
SNX12-203ENST00000465030 TMEM218A2RU14 115 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms