RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MPV17L2Q567V2 206 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 ATRAIDQ6UW56 229 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
SQSTM1-205ENST00000464493 CKS2P33552 79 aa9.73□□□□□ -0.85
SQSTM1-205ENST00000464493 AMTP48728 403 aa9.73□□□□□ -0.85
SQSTM1-205ENST00000464493 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
SQSTM1-205ENST00000464493 NRACQ8N912 160 aa9.73□□□□□ -0.85
SQSTM1-205ENST00000464493 TMEM70Q9BUB7 260 aa9.73□□□□□ -0.85
SQSTM1-205ENST00000464493 C7orf77A4D0Y5 90 aa9.72□□□□□ -0.85
SQSTM1-205ENST00000464493 UBE2L6O14933 153 aa9.72□□□□□ -0.85
SQSTM1-205ENST00000464493 Q8N976 141 aa9.72□□□□□ -0.85
SQSTM1-205ENST00000464493 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
SQSTM1-205ENST00000464493 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
SQSTM1-205ENST00000464493 VCYO14598 125 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 PSCAO43653 123 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 APCSP02743 223 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 RBX1P62877 108 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 RHEBQ15382 184 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 UBE2WQ96B02 151 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 TM2D2Q9BX73 214 aa9.71□□□□□ -0.86
SQSTM1-205ENST00000464493 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 TRBV27A0A0K0K1C4 114 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 A0A1B0GUV1 79 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 D6R8Y8 96 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 PPBPP02775 128 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 Q0VG73 95 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 RPS10P5Q9NQ39 176 aa9.7□□□□□ -0.86
SQSTM1-205ENST00000464493 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 EREGO14944 169 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 TSHBP01222 138 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 APOC3P02656 99 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 S100PP25815 95 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 NDUFA5Q16718 116 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 RMI2Q96E14 147 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 C20orf78Q9BR46 151 aa9.69□□□□□ -0.86
SQSTM1-205ENST00000464493 A0A087WTM6 91 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 H7C423 109 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 CRPP02741 224 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 ENHOQ6UWT2 76 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 TMEM136Q6ZRR5 245 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 ORMDL3Q8N138 153 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 COX11Q9Y6N1 276 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 PKHD1P08F94 4074 aa9.68□□□□□ -0.86
SQSTM1-205ENST00000464493 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 IGKV2D-24A0A075B6R9 120 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 IGKV2-29A2NJV5 120 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 PHOX2AO14813 284 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 ESDP10768 282 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 SVBPQ8N300 66 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
SQSTM1-205ENST00000464493 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 SNAPINO95295 136 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 NPYP01303 97 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 FCER1GP30273 86 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 AMMECR1LQ6DCA0 310 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 SPATA12Q7Z6I5 190 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 PRELID3AQ96N28 172 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
SQSTM1-205ENST00000464493 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
SQSTM1-205ENST00000464493 MIAQ16674 131 aa9.65□□□□□ -0.86
SQSTM1-205ENST00000464493 CLPSL2Q6UWE3 100 aa9.65□□□□□ -0.86
SQSTM1-205ENST00000464493 C1orf43Q9BWL3 253 aa9.65□□□□□ -0.86
SQSTM1-205ENST00000464493 FGF6P10767 208 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 REG3AQ06141 175 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 SMIM2Q9BVW6 85 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 LAMTOR2Q9Y2Q5 125 aa9.64□□□□□ -0.87
SQSTM1-205ENST00000464493 TCAPO15273 167 aa9.63□□□□□ -0.87
SQSTM1-205ENST00000464493 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
SQSTM1-205ENST00000464493 C16orf90A8MZG2 172 aa9.62□□□□□ -0.87
SQSTM1-205ENST00000464493 ZNF25P17030 456 aaPredicted RBP9.62□□□□□ -0.87
SQSTM1-205ENST00000464493 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
SQSTM1-205ENST00000464493 GNB1LQ9BYB4 327 aa9.62□□□□□ -0.87
SQSTM1-205ENST00000464493 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
SQSTM1-205ENST00000464493 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
SQSTM1-205ENST00000464493 HLA-DQA1P01909 254 aa9.61□□□□□ -0.87
SQSTM1-205ENST00000464493 COX19Q49B96 90 aa9.61□□□□□ -0.87
SQSTM1-205ENST00000464493 BAALCQ8WXS3 180 aa9.61□□□□□ -0.87
SQSTM1-205ENST00000464493 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
SQSTM1-205ENST00000464493 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 LOC389332A0A1B0GUA5 103 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 LECT2O14960 151 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 KIAA1644Q3SXP7 199 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 MRPL52Q86TS9 123 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 Q8N814 137 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 OR5A1Q8NGJ0 315 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 TMEM18Q96B42 140 aa9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 DYNC1H1Q14204 4646 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-205ENST00000464493 RAB5AP20339 215 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms