RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TRBV7-3A0A075B6L6 115 aa15.74■□□□□ 0.11
PDLIM2-216ENST00000464275 RHODO00212 210 aa15.74■□□□□ 0.11
PDLIM2-216ENST00000464275 CFAP126Q5VTH2 177 aa15.74■□□□□ 0.11
PDLIM2-216ENST00000464275 IL17DQ8TAD2 202 aa15.74■□□□□ 0.11
PDLIM2-216ENST00000464275 MRPL16Q9NX20 251 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-216ENST00000464275 HERVK_113P61574 105 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 IGHV3-73A0A0B4J1V6 119 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 A0A1B0GWB2 263 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 IGIPA6NJ69 53 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 RS1O15537 224 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 GIG44P09565 113 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 RNF151Q2KHN1 245 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 C1QTNF4Q9BXJ3 329 aa15.73■□□□□ 0.11
PDLIM2-216ENST00000464275 C2CD3Q4AC94 2353 aa15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 RPL35AP18077 110 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 INSL3P51460 131 aa15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 PMVKQ15126 192 aa15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 RHOHQ15669 191 aa15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 TP53TG1Q9Y2A0 90 aa15.72■□□□□ 0.11
PDLIM2-216ENST00000464275 I3L3M4 83 aa15.71■□□□□ 0.11
PDLIM2-216ENST00000464275 TMEM263Q8WUH6 116 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-216ENST00000464275 NAA38Q9BRA0 125 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-216ENST00000464275 VPS25Q9BRG1 176 aa15.71■□□□□ 0.11
PDLIM2-216ENST00000464275 PRADC1Q9BSG0 188 aa15.71■□□□□ 0.11
PDLIM2-216ENST00000464275 HIVEP1P15822 2718 aa15.7■□□□□ 0.1
PDLIM2-216ENST00000464275 C12orf74Q32Q52 190 aa15.7■□□□□ 0.1
PDLIM2-216ENST00000464275 TMEM238LA0A1B0GVL6 79 aa15.69■□□□□ 0.1
PDLIM2-216ENST00000464275 A6NJY4 79 aa15.69■□□□□ 0.1
PDLIM2-216ENST00000464275 C9orf66Q5T8R8 295 aa15.69■□□□□ 0.1
PDLIM2-216ENST00000464275 IGLL5B9A064 214 aa15.69■□□□□ 0.1
PDLIM2-216ENST00000464275 TSHBP01222 138 aa15.69■□□□□ 0.1
PDLIM2-216ENST00000464275 CITED1Q99966 193 aa15.69■□□□□ 0.1
PDLIM2-216ENST00000464275 K7ERJ3 54 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 IGHV3-53P01767 116 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 DEFB104AQ8WTQ1 72 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 TNFRSF18Q9Y5U5 241 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 Q6ZSN1 163 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 CSNK1G2-AS1Q8NCQ2 148 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 ZNF479Q96JC4 524 aa15.67■□□□□ 0.1
PDLIM2-216ENST00000464275 IGLV4-69A0A075B6H9 119 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 C11orf86A6NJI1 115 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 ZNF815PA8K554 130 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 P0DMU3 169 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 FAM231AP0DMU4 169 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 FAM231CP0DMU5 169 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 RPL39P62891 51 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 DNAJC30Q96LL9 226 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 TRGV1A0A0A0MS02 117 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 C16orf74Q96GX8 76 aa15.66■□□□□ 0.1
PDLIM2-216ENST00000464275 G3V4G9 280 aa15.64■□□□□ 0.09
PDLIM2-216ENST00000464275 RRN3P1Q2M238 152 aa15.64■□□□□ 0.09
PDLIM2-216ENST00000464275 DAZ2Q13117 558 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-216ENST00000464275 C20orf203Q8NBC4 194 aa15.64■□□□□ 0.09
PDLIM2-216ENST00000464275 F8W1H4 67 aa15.63■□□□□ 0.09
PDLIM2-216ENST00000464275 SCGB1D4Q6XE38 83 aa15.63■□□□□ 0.09
PDLIM2-216ENST00000464275 NFE4Q86UQ8 179 aa15.62■□□□□ 0.09
PDLIM2-216ENST00000464275 Q6ZTI0 123 aa15.61■□□□□ 0.09
PDLIM2-216ENST00000464275 SPATA3Q8NHX4 192 aa15.61■□□□□ 0.09
PDLIM2-216ENST00000464275 TRAV4A0A0B4J268 109 aa15.6■□□□□ 0.09
PDLIM2-216ENST00000464275 SPANXB1Q9NS25 103 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-216ENST00000464275 NOP10Q9NPE3 64 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-216ENST00000464275 PLAC8L1A1L4L8 177 aa15.59■□□□□ 0.09
PDLIM2-216ENST00000464275 JMJD1CQ15652 2540 aa15.59■□□□□ 0.09
PDLIM2-216ENST00000464275 OVOL2Q9BRP0 275 aa15.58■□□□□ 0.09
PDLIM2-216ENST00000464275 Q9UF83 564 aa15.58■□□□□ 0.09
PDLIM2-216ENST00000464275 UBE2D1P51668 147 aa15.58■□□□□ 0.08
PDLIM2-216ENST00000464275 SRSF9Q13242 221 aaKnown RBP eCLIP15.57■□□□□ 0.08
PDLIM2-216ENST00000464275 CRYBA4P53673 196 aa15.56■□□□□ 0.08
PDLIM2-216ENST00000464275 A0A0J9YY99 117 aa15.56■□□□□ 0.08
PDLIM2-216ENST00000464275 LYRM7Q5U5X0 104 aa15.56■□□□□ 0.08
PDLIM2-216ENST00000464275 CIDEAO60543 219 aa15.55■□□□□ 0.08
PDLIM2-216ENST00000464275 COTL1Q14019 142 aa15.55■□□□□ 0.08
PDLIM2-216ENST00000464275 TMEM170BQ5T4T1 132 aa15.55■□□□□ 0.08
PDLIM2-216ENST00000464275 PYGO1Q9Y3Y4 419 aa15.55■□□□□ 0.08
PDLIM2-216ENST00000464275 TRBV10-1A0A0K0K1A3 114 aa15.54■□□□□ 0.08
PDLIM2-216ENST00000464275 K7EQD1 137 aa15.54■□□□□ 0.08
PDLIM2-216ENST00000464275 ZNRF2Q8NHG8 242 aa15.54■□□□□ 0.08
PDLIM2-216ENST00000464275 PLEKHB2Q96CS7 222 aa15.54■□□□□ 0.08
PDLIM2-216ENST00000464275 J3QR89 54 aa15.53■□□□□ 0.08
PDLIM2-216ENST00000464275 C21orf62-AS1Q17RA5 79 aa15.53■□□□□ 0.08
PDLIM2-216ENST00000464275 WFDC9Q8NEX5 89 aa15.53■□□□□ 0.08
PDLIM2-216ENST00000464275 SLC25A29Q8N8R3 303 aa15.53■□□□□ 0.08
PDLIM2-216ENST00000464275 CHCHD7Q9BUK0 85 aa15.53■□□□□ 0.08
PDLIM2-216ENST00000464275 J3QQQ9 107 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 LEPROTO15243 131 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 GAGE7O76087 117 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 GAGE12FP0CL80 117 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 GAGE12GP0CL81 117 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 GAGE12IP0CL82 117 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 LGALS3P17931 250 aaKnown RBP15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 F8P00451 2351 aa15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 NIPBLQ6KC79 2804 aaeCLIP15.52■□□□□ 0.07
PDLIM2-216ENST00000464275 IGLV4-3A0A075B6K6 122 aa15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 RPL36AP83881 106 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 RPL36ALQ969Q0 106 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 OPRPNQ99935 248 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 PGPEP1Q9NXJ5 209 aa15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 NOTCH3Q9UM47 2321 aa15.51■□□□□ 0.07
PDLIM2-216ENST00000464275 TRGV2A0A075B6R0 118 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms