RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 S100A8P05109 93 aa11.13□□□□□ -0.63
HLA-DPA1-245ENST00000463066 FUSP35637 526 aaKnown RBP eCLIP11.13□□□□□ -0.63
HLA-DPA1-245ENST00000463066 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
HLA-DPA1-245ENST00000463066 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
HLA-DPA1-245ENST00000463066 CLRN3Q8NCR9 226 aa11.13□□□□□ -0.63
HLA-DPA1-245ENST00000463066 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
HLA-DPA1-245ENST00000463066 TSHBP01222 138 aa11.12□□□□□ -0.63
HLA-DPA1-245ENST00000463066 PMCHP20382 165 aa11.12□□□□□ -0.63
HLA-DPA1-245ENST00000463066 LAGE3Q14657 143 aa11.12□□□□□ -0.63
HLA-DPA1-245ENST00000463066 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
HLA-DPA1-245ENST00000463066 CTDSP1Q9GZU7 261 aa11.12□□□□□ -0.63
HLA-DPA1-245ENST00000463066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 D6R8Y8 96 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 I3L3M4 83 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 ANGP03950 147 aaKnown RBP11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 CKS2P33552 79 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 KRTAP10-2P60368 255 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
HLA-DPA1-245ENST00000463066 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
HLA-DPA1-245ENST00000463066 A0A087WTM6 91 aa11.1□□□□□ -0.63
HLA-DPA1-245ENST00000463066 NPYP01303 97 aa11.1□□□□□ -0.63
HLA-DPA1-245ENST00000463066 APOC3P02656 99 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 APCSP02743 223 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 WFDC2Q14508 124 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 SPATA12Q7Z6I5 190 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 IMMP2LQ96T52 175 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 RPS10P5Q9NQ39 176 aa11.09□□□□□ -0.63
HLA-DPA1-245ENST00000463066 TRAV8-3A0A0A6YYJ7 113 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 LRCOL1A6NCL2 159 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PSCAO43653 123 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 ELOBQ15370 118 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 SLC7A5P1Q8MH63 180 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
HLA-DPA1-245ENST00000463066 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
HLA-DPA1-245ENST00000463066 UBE2L6O14933 153 aa11.07□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PKIAP61925 76 aa11.07□□□□□ -0.64
HLA-DPA1-245ENST00000463066 TMEM136Q6ZRR5 245 aa11.07□□□□□ -0.64
HLA-DPA1-245ENST00000463066 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
HLA-DPA1-245ENST00000463066 VCYO14598 125 aa11.06□□□□□ -0.64
HLA-DPA1-245ENST00000463066 LECT2O14960 151 aa11.06□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PPP1R17O96001 155 aa11.06□□□□□ -0.64
HLA-DPA1-245ENST00000463066 ESDP10768 282 aa11.06□□□□□ -0.64
HLA-DPA1-245ENST00000463066 RHEBQ15382 184 aa11.06□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 CRPP02741 224 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 FGF6P10767 208 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 TM2D2Q9BX73 214 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PRR34Q9NV39 138 aa11.05□□□□□ -0.64
HLA-DPA1-245ENST00000463066 A0A1B0GUV1 79 aa11.04□□□□□ -0.64
HLA-DPA1-245ENST00000463066 RNASEKQ6P5S7 137 aaKnown RBP11.04□□□□□ -0.64
HLA-DPA1-245ENST00000463066 BAALCQ8WXS3 180 aa11.04□□□□□ -0.64
HLA-DPA1-245ENST00000463066 C20orf78Q9BR46 151 aa11.04□□□□□ -0.64
HLA-DPA1-245ENST00000463066 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
HLA-DPA1-245ENST00000463066 PPBPP02775 128 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 S100PP25815 95 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 FCER1GP30273 86 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 REG3AQ06141 175 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 KIAA1644Q3SXP7 199 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 AMMECR1LQ6DCA0 310 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 RMI2Q96E14 147 aa11.03□□□□□ -0.64
HLA-DPA1-245ENST00000463066 IGLV10-54A0A075B6I4 117 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 TRAV9-1A0A075B6T8 112 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 TCAPO15273 167 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 Q0VG73 95 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 NDUFA5Q16718 116 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 C1orf43Q9BWL3 253 aa11.02□□□□□ -0.65
HLA-DPA1-245ENST00000463066 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
HLA-DPA1-245ENST00000463066 IGKV3OR2-268A0A0C4DH90 116 aa11.01□□□□□ -0.65
HLA-DPA1-245ENST00000463066 LOC389332A0A1B0GUA5 103 aa11.01□□□□□ -0.65
HLA-DPA1-245ENST00000463066 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
HLA-DPA1-245ENST00000463066 SVBPQ8N300 66 aa11.01□□□□□ -0.65
HLA-DPA1-245ENST00000463066 DNAH5Q8TE73 4624 aa11.01□□□□□ -0.65
HLA-DPA1-245ENST00000463066 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
HLA-DPA1-245ENST00000463066 PHOX2AO14813 284 aa11□□□□□ -0.65
HLA-DPA1-245ENST00000463066 EREGO14944 169 aa11□□□□□ -0.65
HLA-DPA1-245ENST00000463066 SNAPINO95295 136 aa11□□□□□ -0.65
HLA-DPA1-245ENST00000463066 MIAQ16674 131 aa11□□□□□ -0.65
HLA-DPA1-245ENST00000463066 KIR2DL4Q99706 377 aa11□□□□□ -0.65
HLA-DPA1-245ENST00000463066 H7C423 109 aa10.99□□□□□ -0.65
HLA-DPA1-245ENST00000463066 Q8N814 137 aa10.99□□□□□ -0.65
HLA-DPA1-245ENST00000463066 LRP1BQ9NZR2 4599 aa10.98□□□□□ -0.65
HLA-DPA1-245ENST00000463066 HLA-DQA1P01909 254 aa10.98□□□□□ -0.65
HLA-DPA1-245ENST00000463066 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
HLA-DPA1-245ENST00000463066 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
HLA-DPA1-245ENST00000463066 MRPL52Q86TS9 123 aaKnown RBP10.97□□□□□ -0.65
HLA-DPA1-245ENST00000463066 OR5A1Q8NGJ0 315 aa10.97□□□□□ -0.65
HLA-DPA1-245ENST00000463066 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
HLA-DPA1-245ENST00000463066 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms