RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RAB5BP61020 215 aa9.89□□□□□ -0.83
COL6A1-202ENST00000463060 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
COL6A1-202ENST00000463060 PLECQ15149 4684 aaKnown RBP9.88□□□□□ -0.83
COL6A1-202ENST00000463060 TCAPO15273 167 aa9.88□□□□□ -0.83
COL6A1-202ENST00000463060 ESDP10768 282 aa9.88□□□□□ -0.83
COL6A1-202ENST00000463060 ESRGQ1W209 222 aa9.88□□□□□ -0.83
COL6A1-202ENST00000463060 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
COL6A1-202ENST00000463060 KIR2DL4Q99706 377 aa9.88□□□□□ -0.83
COL6A1-202ENST00000463060 TRBV6-8A0A0A6YYG3 113 aa9.87□□□□□ -0.83
COL6A1-202ENST00000463060 NUPR1O60356 82 aa9.87□□□□□ -0.83
COL6A1-202ENST00000463060 COTL1Q14019 142 aa9.87□□□□□ -0.83
COL6A1-202ENST00000463060 TMEM97Q5BJF2 176 aa9.87□□□□□ -0.83
COL6A1-202ENST00000463060 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
COL6A1-202ENST00000463060 CHCHD7Q9BUK0 85 aa9.87□□□□□ -0.83
COL6A1-202ENST00000463060 LAGE3Q14657 143 aa9.86□□□□□ -0.83
COL6A1-202ENST00000463060 FA2HQ7L5A8 372 aa9.86□□□□□ -0.83
COL6A1-202ENST00000463060 BAGE3Q86Y29 109 aa9.86□□□□□ -0.83
COL6A1-202ENST00000463060 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
COL6A1-202ENST00000463060 TENM2Q9NT68 2774 aa9.86□□□□□ -0.83
COL6A1-202ENST00000463060 SERF1AO75920 110 aa9.85□□□□□ -0.83
COL6A1-202ENST00000463060 LELP1Q5T871 98 aa9.85□□□□□ -0.83
COL6A1-202ENST00000463060 AP5S1Q9NUS5 200 aa9.85□□□□□ -0.83
COL6A1-202ENST00000463060 RYR3Q15413 4870 aa9.85□□□□□ -0.83
COL6A1-202ENST00000463060 A0A096LNJ9 63 aa9.84□□□□□ -0.83
COL6A1-202ENST00000463060 IGHV1-24A0A0C4DH33 117 aa9.84□□□□□ -0.83
COL6A1-202ENST00000463060 C3orf84H3BNL1 204 aa9.84□□□□□ -0.83
COL6A1-202ENST00000463060 FCER1GP30273 86 aa9.84□□□□□ -0.83
COL6A1-202ENST00000463060 NDUFA6P56556 154 aa9.84□□□□□ -0.83
COL6A1-202ENST00000463060 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
COL6A1-202ENST00000463060 AMTP48728 403 aa9.83□□□□□ -0.84
COL6A1-202ENST00000463060 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
COL6A1-202ENST00000463060 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
COL6A1-202ENST00000463060 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
COL6A1-202ENST00000463060 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
COL6A1-202ENST00000463060 VPS13DQ5THJ4 4388 aa9.82□□□□□ -0.84
COL6A1-202ENST00000463060 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
COL6A1-202ENST00000463060 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
COL6A1-202ENST00000463060 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
COL6A1-202ENST00000463060 H7C423 109 aa9.81□□□□□ -0.84
COL6A1-202ENST00000463060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.8□□□□□ -0.84
COL6A1-202ENST00000463060 IGKV2-29A2NJV5 120 aaPredicted RBP9.8□□□□□ -0.84
COL6A1-202ENST00000463060 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 CCL18P55774 89 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 RPL39P62891 51 aaKnown RBP9.8□□□□□ -0.84
COL6A1-202ENST00000463060 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 MRPL52Q86TS9 123 aaKnown RBP9.8□□□□□ -0.84
COL6A1-202ENST00000463060 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 UPK3BQ9BT76 320 aa9.8□□□□□ -0.84
COL6A1-202ENST00000463060 HSBP1O75506 76 aa9.79□□□□□ -0.84
COL6A1-202ENST00000463060 G0S2P27469 103 aa9.79□□□□□ -0.84
COL6A1-202ENST00000463060 PMCHL1Q16048 86 aa9.79□□□□□ -0.84
COL6A1-202ENST00000463060 FAM19A2Q8N3H0 131 aa9.79□□□□□ -0.84
COL6A1-202ENST00000463060 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
COL6A1-202ENST00000463060 A0A1B0GUV1 79 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 CHCHD5Q9BSY4 110 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 CYSLTR1Q9Y271 337 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 PYGO1Q9Y3Y4 419 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 CSDC2Q9Y534 153 aaKnown RBP9.78□□□□□ -0.84
COL6A1-202ENST00000463060 DNAH1Q9P2D7 4330 aa9.78□□□□□ -0.84
COL6A1-202ENST00000463060 TRAV8-6A0A0B4J262 113 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 LINC01549A6NIU2 74 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 HBDP02042 147 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 S100A6P06703 90 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 FGF6P10767 208 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.85
COL6A1-202ENST00000463060 SNRPEP62304 92 aaKnown RBP9.77□□□□□ -0.85
COL6A1-202ENST00000463060 GAGE6Q13070 117 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.85
COL6A1-202ENST00000463060 TMA7Q9Y2S6 64 aaKnown RBP9.77□□□□□ -0.85
COL6A1-202ENST00000463060 ERASQ7Z444 233 aa9.76□□□□□ -0.85
COL6A1-202ENST00000463060 TMEM18Q96B42 140 aa9.76□□□□□ -0.85
COL6A1-202ENST00000463060 PACRGQ96M98 296 aaPredicted RBP9.76□□□□□ -0.85
COL6A1-202ENST00000463060 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
COL6A1-202ENST00000463060 LYSTQ99698 3801 aa9.76□□□□□ -0.85
COL6A1-202ENST00000463060 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 DNAH10OSP0CZ25 163 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 RBX1P62877 108 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 MPV17L2Q567V2 206 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 LGALS9CQ6DKI2 356 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 Q8N3U1 123 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 TIMM17AQ99595 171 aa9.75□□□□□ -0.85
COL6A1-202ENST00000463060 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 UBE2L6O14933 153 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 NPSP0C0P6 89 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
COL6A1-202ENST00000463060 PKIAP61925 76 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
COL6A1-202ENST00000463060 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 LINC00173Q6ZV60 143 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 CDC42SE2Q9NRR3 84 aa9.74□□□□□ -0.85
COL6A1-202ENST00000463060 DNAH6Q9C0G6 4158 aa9.73□□□□□ -0.85
COL6A1-202ENST00000463060 TMEM262E9PQX1 116 aa9.73□□□□□ -0.85
COL6A1-202ENST00000463060 Q8N976 141 aa9.73□□□□□ -0.85
COL6A1-202ENST00000463060 SCGB3A1Q96QR1 104 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms