RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 TMEM170BQ5T4T1 132 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 XAF1Q6GPH4 301 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 NDUFA4L2Q9NRX3 87 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 CDK13Q14004 1512 aaKnown RBP3.37□□□□□ -1.87
SGCE-209ENST00000462731 ATRXP46100 2492 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 ZGRF1Q86YA3 2104 aa3.37□□□□□ -1.87
SGCE-209ENST00000462731 DUOX2Q9NRD8 1548 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 TRBV6-7A0A0A0MS04 114 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 A8MU10 97 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 JMJD7-PLA2G4BH0Y9G9 81 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 PPYP01298 95 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 IGLV3-1P01715 115 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 SSBP1Q04837 148 aaKnown RBP3.36□□□□□ -1.87
SGCE-209ENST00000462731 HEATR1Q9H583 2144 aaKnown RBP3.36□□□□□ -1.87
SGCE-209ENST00000462731 INO80Q9ULG1 1556 aaPredicted RBP3.36□□□□□ -1.87
SGCE-209ENST00000462731 PLXNA1Q9UIW2 1896 aa3.36□□□□□ -1.87
SGCE-209ENST00000462731 ZNF142P52746 1687 aaPredicted RBP3.36□□□□□ -1.87
SGCE-209ENST00000462731 LTN1O94822 1766 aa3.35□□□□□ -1.87
SGCE-209ENST00000462731 LRRC9Q6ZRR7 1453 aa3.35□□□□□ -1.87
SGCE-209ENST00000462731 C10orf55Q5SWW7 151 aa3.35□□□□□ -1.87
SGCE-209ENST00000462731 PRR9Q5T870 116 aa3.35□□□□□ -1.87
SGCE-209ENST00000462731 Q86TA4 180 aa3.35□□□□□ -1.87
SGCE-209ENST00000462731 PPRC1Q5VV67 1664 aaKnown RBP3.35□□□□□ -1.87
SGCE-209ENST00000462731 MYH4Q9Y623 1939 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 MROH1Q8NDA8 1641 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 A0A1W2PNN7 141 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 HMGN4O00479 90 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 SMIM13P0DJ93 91 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 RNASE3P12724 160 aaKnown RBP3.34□□□□□ -1.87
SGCE-209ENST00000462731 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 TVP23CQ96ET8 276 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 TMEM14BQ9NUH8 114 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 V9GYH0 126 aa3.34□□□□□ -1.87
SGCE-209ENST00000462731 DIP2CQ9Y2E4 1556 aa3.34□□□□□ -1.88
SGCE-209ENST00000462731 A0A087WWC5 75 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 H3BRN7 92 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 HMGN2P05204 90 aaKnown RBP3.33□□□□□ -1.88
SGCE-209ENST00000462731 SFTA2Q6UW10 78 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 DEFB132Q7Z7B7 95 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 KLK9Q9UKQ9 250 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 SETBP1Q9Y6X0 1596 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 TMEM131LA2VDJ0 1609 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 IQGAP3Q86VI3 1631 aa3.33□□□□□ -1.88
SGCE-209ENST00000462731 ZNF815PA8K554 130 aa3.32□□□□□ -1.88
SGCE-209ENST00000462731 LINC00315P59091 139 aa3.32□□□□□ -1.88
SGCE-209ENST00000462731 CUX1P39880 1505 aa3.32□□□□□ -1.88
SGCE-209ENST00000462731 SCN11AQ9UI33 1791 aa3.32□□□□□ -1.88
SGCE-209ENST00000462731 BAZ2BQ9UIF8 2168 aaKnown RBP3.31□□□□□ -1.88
SGCE-209ENST00000462731 IGLV3-32A0A0A0MS00 114 aa3.31□□□□□ -1.88
SGCE-209ENST00000462731 SAA2P0DJI9 122 aaPredicted RBP3.31□□□□□ -1.88
SGCE-209ENST00000462731 CCL3L1P16619 93 aa3.31□□□□□ -1.88
SGCE-209ENST00000462731 DEFB121Q5J5C9 76 aa3.31□□□□□ -1.88
SGCE-209ENST00000462731 AMELXQ99217 191 aa3.31□□□□□ -1.88
SGCE-209ENST00000462731 ZFHX2Q9C0A1 2572 aaPredicted RBP3.31□□□□□ -1.88
SGCE-209ENST00000462731 TOP2BQ02880 1626 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 NEXMIFQ5QGS0 1516 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 IGKV2-24A0A0C4DH68 120 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 C7orf77A4D0Y5 90 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 C10orf142B7Z368 130 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 PPP1R17O96001 155 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 SPAG11BQ08648 103 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 PSMG4Q5JS54 123 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 SPAG11AQ6PDA7 123 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 DOCK2Q92608 1830 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 STRCP1A6NGW2 1772 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 COL4A2P08572 1712 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 LRRC37A3O60309 1634 aa3.3□□□□□ -1.88
SGCE-209ENST00000462731 ABCA10Q8WWZ4 1543 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 ADAMTS9Q9P2N4 1935 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 TRGV4A0A0C4DH28 118 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 UMAD1C9J7I0 102 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 F8WEM9 126 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 WFDC10AQ9H1F0 79 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 SPAG17Q6Q759 2223 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 UNC13CQ8NB66 2214 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 KNDC1Q76NI1 1749 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 EFCAB5A4FU69 1503 aa3.29□□□□□ -1.88
SGCE-209ENST00000462731 MYO5CQ9NQX4 1742 aa3.28□□□□□ -1.88
SGCE-209ENST00000462731 CR1P17927 2039 aa3.28□□□□□ -1.88
SGCE-209ENST00000462731 TTTY12Q9BZ98 90 aa3.28□□□□□ -1.88
SGCE-209ENST00000462731 TMEM14CQ9P0S9 112 aa3.28□□□□□ -1.88
SGCE-209ENST00000462731 HMGXB3Q12766 1538 aa3.28□□□□□ -1.88
SGCE-209ENST00000462731 ARFGEF3Q5TH69 2177 aa3.28□□□□□ -1.88
SGCE-209ENST00000462731 UBR1Q8IWV7 1749 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 CTTNBP2Q8WZ74 1663 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 EXPH5Q8NEV8 1989 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 IGKV3OR2-268A0A0C4DH90 116 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 IQCF6A8MYZ5 107 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 INE1O15225 51 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 IGKV1-17P01599 117 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 FAM74A4Q5TZK3 123 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 PPP1R1CQ8WVI7 109 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 CYYR1Q96J86 154 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 EHBP1L1Q8N3D4 1523 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 NRXN2Q9P2S2 1712 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 CEP192Q8TEP8 1941 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 MED12Q93074 2177 aa3.27□□□□□ -1.89
SGCE-209ENST00000462731 GPR179Q6PRD1 2367 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms