RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 F5H697 171 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 PSCAO43653 123 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 KRTAP10-4P60372 401 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 PGLYRP4Q96LB8 373 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 DNAJC30Q96LL9 226 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 Q9HAA7 133 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 IFITM2Q01629 132 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 PEA15Q15121 130 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 TWIST1Q15672 202 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 RASL11AQ6T310 242 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 TSKUQ8WUA8 353 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 GFRA4Q9GZZ7 299 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 SMDT1Q9H4I9 107 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 NAT8Q9UHE5 227 aa5.22□□□□□ -1.57
CDC42BPA-210ENST00000462553 TRAV26-2A0A0B4J265 109 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 HIGD1CA8MV81 97 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 H7C1H1 209 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 ADIRFQ15847 76 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 TMEM241Q24JQ0 296 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 MPV17L2Q567V2 206 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 RPL39LQ96EH5 51 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 CHCHD7Q9BUK0 85 aa5.21□□□□□ -1.58
CDC42BPA-210ENST00000462553 FAM231BA6NCW3 169 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 EIF4EBP3O60516 100 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 GAS8-AS1O95177 125 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 PLA2G1BP04054 148 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 IQCJQ1A5X6 159 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 CLLU1Q5K131 121 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 ATRAIDQ6UW56 229 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 NUP35Q8NFH5 326 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 RNF185Q96GF1 192 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 NIT2Q9NQR4 276 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 KLK12Q9UKR0 248 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 LRP2P98164 4655 aa5.2□□□□□ -1.58
CDC42BPA-210ENST00000462553 TRBV25-1A0A075B6N4 114 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 TRAV8-3A0A0A6YYJ7 113 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 A0A1B0GUT8 65 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 SMIM27A0A1W2PRY6 76 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 LECT2O14960 151 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 LINC01620Q4KN68 170 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 TMEM97Q5BJF2 176 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 SCXQ7RTU7 201 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 C15orf54Q8N8G6 183 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 DEFB104AQ8WTQ1 72 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 TMEM191AQ9H0A3 160 aa5.19□□□□□ -1.58
CDC42BPA-210ENST00000462553 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 A0A087WX48 190 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 IGHV1-24A0A0C4DH33 117 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 TRBV6-5A0A0K0K1A5 114 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 RBX1P62877 108 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 GAGE6Q13070 117 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 ENHOQ6UWT2 76 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 Q8N976 141 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 UBE2WQ96B02 151 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 CHCHD5Q9BSY4 110 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 URGCP-MRPS24S4R325 110 aa5.18□□□□□ -1.58
CDC42BPA-210ENST00000462553 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 IGLV4-60A0A075B6I1 120 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 IGKV2D-24A0A075B6R9 120 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 TMEM262E9PQX1 116 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 RAB4AP20338 218 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 RPS10P46783 165 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 KRTAP26-1Q6PEX3 210 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 SMIM15Q7Z3B0 74 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 AMN1Q8IY45 258 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 C20orf203Q8NBC4 194 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 BORCS7Q96B45 105 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 TMEM243Q9BU79 118 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 TM2D2Q9BX73 214 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 PRR34Q9NV39 138 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 NAT8BQ9UHF3 227 aa5.17□□□□□ -1.58
CDC42BPA-210ENST00000462553 A0A1B0GXF2 115 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 SDHAF1A6NFY7 115 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 SMKR1H3BMG3 65 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 NCR2O95944 276 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 ANGP03950 147 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 ADCYAP1P18509 176 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 AMTP48728 403 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 RAB14P61106 215 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 PKIAP61925 76 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 RIGQ13278 110 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 COTL1Q14019 142 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 ELOBQ15370 118 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 KCNIP4Q6PIL6 250 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 CLPSL2Q6UWE3 100 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 NRACQ8N912 160 aa5.16□□□□□ -1.58
CDC42BPA-210ENST00000462553 A0A1B0GUV1 79 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 TSHBP01222 138 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 POLR2KP53803 58 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 Q0VG73 95 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 MRPL51Q4U2R6 128 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 SERTAD4-AS1Q5TG53 156 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 FAM104BQ5XKR9 115 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 CIRBP-AS1Q8TBR5 109 aa5.15□□□□□ -1.59
CDC42BPA-210ENST00000462553 BAALCQ8WXS3 180 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms