RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 DUX5Q96PT3 197 aa5.4□□□□□ -1.54
SREBF2-204ENST00000462539 CHCHD7Q9BUK0 85 aa5.4□□□□□ -1.54
SREBF2-204ENST00000462539 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
SREBF2-204ENST00000462539 LAMA5O15230 3695 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 SPTA1P02549 2419 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 IGHV3-73A0A0B4J1V6 119 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 IGHV1-58A0A0C4DH39 117 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 C9JAW5 83 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 SLURP1P55000 103 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 DEFB131AP59861 70 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 CKS1BP61024 79 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 LINC00467Q9BRT7 94 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 SPANXA1Q9NS26 97 aa5.39□□□□□ -1.55
SREBF2-204ENST00000462539 TRAV8-3A0A0A6YYJ7 113 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 TRBV30A0A0K0K1B3 111 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 ADARB2-AS1A8MUL3 147 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 H3BMM0 161 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 ATXN8Q156A1 80 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 MIAQ16674 131 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 Q1RN00 199 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 LINC01620Q4KN68 170 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 CEMP1Q6PRD7 247 aaPredicted RBP5.38□□□□□ -1.55
SREBF2-204ENST00000462539 Q6YL49 198 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 RAX2Q96IS3 184 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 DUX3Q96PT4 197 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 UBE2D4Q9Y2X8 147 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 TNFRSF18Q9Y5U5 241 aa5.38□□□□□ -1.55
SREBF2-204ENST00000462539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.38□□□□□ -1.554e-8■■□□□ 11.9
SREBF2-204ENST00000462539 PRRC2AP48634 2157 aaKnown RBP5.38□□□□□ -1.55
SREBF2-204ENST00000462539 DOPEY2Q9Y3R5 2298 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 H7C2G1 150 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 RS1O15537 224 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 TRIAP1O43715 76 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 TIMM17BO60830 172 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
SREBF2-204ENST00000462539 Q6ZSN1 163 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 C18orf65Q6ZTR6 163 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 C11orf72Q8NBR9 251 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 NRGNQ92686 78 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 VSIG2Q96IQ7 327 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 DNAJC30Q96LL9 226 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 SPXQ9BT56 116 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 MAP6D1Q9H9H5 199 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 NDUFA12Q9UI09 145 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 NBASA2RRP1 2371 aa5.37□□□□□ -1.55
SREBF2-204ENST00000462539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.36□□□□□ -1.55
SREBF2-204ENST00000462539 IGLV5-45A0A087WSX0 123 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 TRBV10-2A0A0K0K1G8 114 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 IGKV2-29A2NJV5 120 aaPredicted RBP5.36□□□□□ -1.55
SREBF2-204ENST00000462539 TMEM262E9PQX1 116 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 IGHV3-53P01767 116 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
SREBF2-204ENST00000462539 DEFB136Q30KP8 78 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 BEAN1Q3B7T3 259 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 ZFAND6Q6FIF0 208 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 Q8N2B8 174 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 CLUHP3Q96NS8 147 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 YAE1D1Q9NRH1 226 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
SREBF2-204ENST00000462539 NDUFA1O15239 70 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 INSP01308 110 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 PRM2P04554 102 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 IGHV4-31P0DP07 118 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 TMEM61Q8N0U2 210 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 NTN5Q8WTR8 489 aaPredicted RBP5.35□□□□□ -1.55
SREBF2-204ENST00000462539 RNF183Q96D59 192 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 CITED1Q99966 193 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 GEMIN7Q9H840 131 aaKnown RBP5.35□□□□□ -1.55
SREBF2-204ENST00000462539 Q9UF83 564 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 AKAP6Q13023 2319 aa5.35□□□□□ -1.55
SREBF2-204ENST00000462539 IGHV3-38A0A0C4DH36 116 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 A8MZ25 164 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 H3BT86 120 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 IFITM1P13164 125 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 HTN1P15515 57 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 TIRAPP58753 221 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 MAPK1IP1LQ8NDC0 245 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 DYNLRB2Q8TF09 96 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 C4orf3Q8WVX3 66 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 UBE2WQ96B02 151 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
SREBF2-204ENST00000462539 PEMTQ9UBM1 199 aa5.34□□□□□ -1.55
SREBF2-204ENST00000462539 HELZ2Q9BYK8 2649 aaKnown RBP5.34□□□□□ -1.55
SREBF2-204ENST00000462539 TRAV8-4A0A0B4J246 113 aa5.33□□□□□ -1.56
SREBF2-204ENST00000462539 IGLV5-39A0A0G2JS06 123 aa5.33□□□□□ -1.56
SREBF2-204ENST00000462539 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
SREBF2-204ENST00000462539 LINC01587Q99440 93 aa5.33□□□□□ -1.56
SREBF2-204ENST00000462539 SPTAN1Q13813 2472 aaKnown RBP5.33□□□□□ -1.56
SREBF2-204ENST00000462539 H7C423 109 aa5.32□□□□□ -1.56
SREBF2-204ENST00000462539 LST1O00453 97 aa5.32□□□□□ -1.56
SREBF2-204ENST00000462539 NPC2P61916 151 aa5.32□□□□□ -1.56
SREBF2-204ENST00000462539 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
SREBF2-204ENST00000462539 Q6ZSV7 163 aa5.32□□□□□ -1.56
SREBF2-204ENST00000462539 TMEM101Q96IK0 257 aa5.32□□□□□ -1.56
SREBF2-204ENST00000462539 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms