RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
ACTB-207ENST00000462494 EDA2RQ9HAV5 297 aa12.34□□□□□ -0.43
ACTB-207ENST00000462494 NBPF19A0A087WUL8 3843 aa12.33□□□□□ -0.44
ACTB-207ENST00000462494 LRRC75A-AS1Q8N1F1 130 aa12.33□□□□□ -0.44
ACTB-207ENST00000462494 NACAE9PAV3 2078 aa12.32□□□□□ -0.44
ACTB-207ENST00000462494 IGHV3-38A0A0C4DH36 116 aa12.32□□□□□ -0.44
ACTB-207ENST00000462494 A0A1W2PRX2 142 aa12.32□□□□□ -0.44
ACTB-207ENST00000462494 PYGO1Q9Y3Y4 419 aa12.32□□□□□ -0.44
ACTB-207ENST00000462494 CUBNO60494 3623 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.31□□□□□ -0.44
ACTB-207ENST00000462494 IGKV2-29A2NJV5 120 aaPredicted RBP12.31□□□□□ -0.44
ACTB-207ENST00000462494 J3QR89 54 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 INSP01308 110 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
ACTB-207ENST00000462494 ZNF418Q8TF45 676 aaPredicted RBP12.31□□□□□ -0.44
ACTB-207ENST00000462494 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
ACTB-207ENST00000462494 UBE2D3P61077 147 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 UBE2D2P62837 147 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 Q6ZSV7 163 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 EPG5Q9HCE0 2579 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 A4D1N5 150 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
ACTB-207ENST00000462494 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
ACTB-207ENST00000462494 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 INSL3P51460 131 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 KRTAP1-3Q8IUG1 177 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 APCP25054 2843 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 SCGB1C2P0DMR2 95 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 MRPS36P82909 103 aaKnown RBP12.29□□□□□ -0.44
ACTB-207ENST00000462494 MUSTN1Q8IVN3 82 aa12.29□□□□□ -0.44
ACTB-207ENST00000462494 WNK1Q9H4A3 2382 aa12.28□□□□□ -0.44
ACTB-207ENST00000462494 AZU1P20160 251 aa12.28□□□□□ -0.44
ACTB-207ENST00000462494 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
ACTB-207ENST00000462494 H7C2G1 150 aa12.27□□□□□ -0.44
ACTB-207ENST00000462494 TCL1BO95988 128 aa12.27□□□□□ -0.44
ACTB-207ENST00000462494 SMCPP49901 116 aaPredicted RBP12.27□□□□□ -0.44
ACTB-207ENST00000462494 STHQ8IWL8 128 aa12.27□□□□□ -0.44
ACTB-207ENST00000462494 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.44
ACTB-207ENST00000462494 UBE2D4Q9Y2X8 147 aa12.27□□□□□ -0.44
ACTB-207ENST00000462494 A0A0J9YXY3 114 aa12.27□□□□□ -0.45
ACTB-207ENST00000462494 TMEM238C9JI98 176 aa12.27□□□□□ -0.45
ACTB-207ENST00000462494 IGHV3-53P01767 116 aa12.27□□□□□ -0.45
ACTB-207ENST00000462494 ODF3L2Q3SX64 289 aa12.27□□□□□ -0.45
ACTB-207ENST00000462494 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
ACTB-207ENST00000462494 GTSF1LQ9H1H1 148 aa12.26□□□□□ -0.45
ACTB-207ENST00000462494 Q6ZUT4 128 aa12.26□□□□□ -0.45
ACTB-207ENST00000462494 WFDC11Q8NEX6 87 aa12.26□□□□□ -0.45
ACTB-207ENST00000462494 PTH2Q96A98 100 aa12.26□□□□□ -0.45
ACTB-207ENST00000462494 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
ACTB-207ENST00000462494 NF1P21359 2839 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 CRYBA4P53673 196 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 A8MZ25 164 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 RS1O15537 224 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 EIF4EBP3O60516 100 aaPredicted RBP12.25□□□□□ -0.45
ACTB-207ENST00000462494 SPINK8P0C7L1 97 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
ACTB-207ENST00000462494 IGHV1-58A0A0C4DH39 117 aa12.24□□□□□ -0.45
ACTB-207ENST00000462494 TMEM86BQ8N661 226 aa12.24□□□□□ -0.45
ACTB-207ENST00000462494 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
ACTB-207ENST00000462494 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 TINCRA0A1B0GVN0 87 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 PRSS2P07478 247 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
ACTB-207ENST00000462494 C1QTNF4Q9BXJ3 329 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 CCL24O00175 119 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 SIGMAR1Q99720 223 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 GEMIN7Q9H840 131 aaKnown RBP12.23□□□□□ -0.45
ACTB-207ENST00000462494 ERG28Q9UKR5 140 aa12.23□□□□□ -0.45
ACTB-207ENST00000462494 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 FOXI1Q12951 378 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 C1orf158Q8N1D5 194 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 NDUFA12Q9UI09 145 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 Q1RN00 199 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 ESM1Q9NQ30 184 aa12.22□□□□□ -0.45
ACTB-207ENST00000462494 CCDC168Q8NDH2 2452 aa12.21□□□□□ -0.45
ACTB-207ENST00000462494 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.21□□□□□ -0.46
ACTB-207ENST00000462494 A0A0B4J2C4 111 aa12.21□□□□□ -0.46
ACTB-207ENST00000462494 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.46
ACTB-207ENST00000462494 TRAV25A0A0B4J276 109 aa12.2□□□□□ -0.46
ACTB-207ENST00000462494 NPC2P61916 151 aa12.2□□□□□ -0.46
ACTB-207ENST00000462494 ADAMTSL4-AS1Q5T5F5 129 aa12.19□□□□□ -0.46
ACTB-207ENST00000462494 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
ACTB-207ENST00000462494 LITAFQ99732 161 aa12.19□□□□□ -0.46
ACTB-207ENST00000462494 CITED2Q99967 270 aaPredicted RBP12.19□□□□□ -0.46
ACTB-207ENST00000462494 SETD2Q9BYW2 2564 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms