RNA–Protein interactions for RNA: ENST00000461739.1

ARHGAP4-215, Transcript of Rho GTPase activating protein 4, human

TSL 3

Gene ARHGAP4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-215	ENST00000461739	TRAV9-1	A0A075B6T8	112 aa		14	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	AMT	P48728	403 aa		14	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	POLR2K	P53803	58 aa	Known RBP	14	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	MPV17L2	Q567V2	206 aa		14	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	TRAV8-3	A0A0A6YYJ7	113 aa		13.99	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	PMCH	P20382	165 aa		13.99	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	CKS2	P33552	79 aa		13.99	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	ATRAID	Q6UW56	229 aa		13.99	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	PKD1	P98161	4303 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	TRBV27	A0A0K0K1C4	114 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	PPBP	P02775	128 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	GAGE6	Q13070	117 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	NDUFA5	Q16718	116 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	DEFB104A	Q8WTQ1	72 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739		Q9HAA7	133 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	KLK12	Q9UKR0	248 aa		13.98	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	TRBV24-1	A0A075B6N3	115 aa		13.97	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	APCS	P02743	223 aa		13.97	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	S100P	P25815	95 aa		13.97	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	SUMO2	P61956	95 aa	Known RBP	13.97	□□□□□ -0.17
ARHGAP4-215	ENST00000461739		D6R8Y8	96 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	VCY	O14598	125 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	UBE2L6	O14933	153 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	APOC3	P02656	99 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	RBX1	P62877	108 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739		Q8N976	141 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	C20orf78	Q9BR46	151 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739	RPS10P5	Q9NQ39	176 aa		13.96	□□□□□ -0.17
ARHGAP4-215	ENST00000461739		A0A1B0GUV1	79 aa		13.95	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	PHOX2A	O14813	284 aa		13.95	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	TSHB	P01222	138 aa		13.95	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	SVBP	Q8N300	66 aa		13.95	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	TM2D2	Q9BX73	214 aa		13.95	□□□□□ -0.18
ARHGAP4-215	ENST00000461739		H7C423	109 aa		13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	SNAPIN	O95295	136 aa		13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	TNFRSF6B	O95407	300 aa		13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	ANG	P03950	147 aa	Known RBP	13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	RPL32	P62910	135 aa	Known RBP	13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739		Q0VG73	95 aa		13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	ORMDL3	Q8N138	153 aa		13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	UBE2W	Q96B02	151 aa		13.94	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	PSCA	O43653	123 aa		13.93	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	RMI2	Q96E14	147 aa		13.93	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	CRP	P02741	224 aa		13.92	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	TMEM136	Q6ZRR5	245 aa		13.92	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	COX11	Q9Y6N1	276 aa		13.92	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	NPY	P01303	97 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	ESD	P10768	282 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	ENHO	Q6UWT2	76 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	PRELID3A	Q96N28	172 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	KIR2DL4	Q99706	377 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	PRR34	Q9NV39	138 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	LAMTOR2	Q9Y2Q5	125 aa		13.91	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	DNAH11	Q96DT5	4516 aa		13.9	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	EREG	O14944	169 aa		13.9	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	C20orf203	Q8NBC4	194 aa		13.9	□□□□□ -0.18
ARHGAP4-215	ENST00000461739	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739		A0A087WTM6	91 aa		13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	TCAP	O15273	167 aa		13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	FCER1G	P30273	86 aa		13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	MIA	Q16674	131 aa		13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	SMIM2	Q9BVW6	85 aa		13.89	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	IGLV4-60	A0A075B6I1	120 aa		13.88	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	IGKV2D-24	A0A075B6R9	120 aa		13.88	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	COX19	Q49B96	90 aa		13.88	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	AMMECR1L	Q6DCA0	310 aa		13.88	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	LINC00269	Q8N2A0	174 aa		13.88	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	LRCOL1	A6NCL2	159 aa		13.87	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	HLA-DQA1	P01909	254 aa		13.87	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	FGF6	P10767	208 aa		13.87	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	ZNF25	P17030	456 aa	Predicted RBP	13.87	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	SLC7A5P1	Q8MH63	180 aa		13.87	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	GNB1L	Q9BYB4	327 aa		13.87	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	PRSS47	A8MTI9	375 aa		13.86	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	REG3A	Q06141	175 aa		13.86	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	C1orf43	Q9BWL3	253 aa		13.86	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	PKHD1	P08F94	4074 aa		13.85	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	RNASEK	Q6P5S7	137 aa	Known RBP	13.85	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	SPATA12	Q7Z6I5	190 aa		13.85	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	CLPSL2	Q6UWE3	100 aa		13.84	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	MRPL52	Q86TS9	123 aa	Known RBP	13.84	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	MAP1LC3A	Q9H492	121 aa		13.84	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	BIRC6	Q9NR09	4857 aa		13.84	□□□□□ -0.19
ARHGAP4-215	ENST00000461739	MT-ND6	P03923	174 aa		13.83	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	MAPKAPK5-AS1	Q8N8E1	139 aa		13.83	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	TMEM101	Q96IK0	257 aa		13.83	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	TRAV8-4	A0A0B4J246	113 aa		13.82	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	SMAGP	Q0VAQ4	97 aa		13.82	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	TMEM18	Q96B42	140 aa		13.82	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	KRTAP10-2	P60368	255 aa		13.81	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	PGPEP1	Q9NXJ5	209 aa		13.81	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	OR5A1	Q8NGJ0	315 aa		13.8	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	CSDC2	Q9Y534	153 aa	Known RBP	13.8	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.79	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	RAB5A	P20339	215 aa		13.79	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	KIAA1644	Q3SXP7	199 aa		13.79	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	CDPF1	Q6NVV7	123 aa		13.79	□□□□□ -0.2
ARHGAP4-215	ENST00000461739		Q8N8P6	123 aa		13.79	□□□□□ -0.2
ARHGAP4-215	ENST00000461739	UBE2D4	Q9Y2X8	147 aa		13.79	□□□□□ -0.2

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