RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 GCSHP23434 173 aa12.22□□□□□ -0.45
HOXD3-204ENST00000459979 WFDC2Q14508 124 aa12.22□□□□□ -0.45
HOXD3-204ENST00000459979 Q8N976 141 aa12.22□□□□□ -0.45
HOXD3-204ENST00000459979 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
HOXD3-204ENST00000459979 IGLV5-52A0A0A0MRZ9 124 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.45
HOXD3-204ENST00000459979 GAGE6Q13070 117 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 ADIRFQ15847 76 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 MIAQ16674 131 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 NUP35Q8NFH5 326 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
HOXD3-204ENST00000459979 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.46
HOXD3-204ENST00000459979 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
HOXD3-204ENST00000459979 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
HOXD3-204ENST00000459979 CRPP02741 224 aa12.2□□□□□ -0.46
HOXD3-204ENST00000459979 COTL1Q14019 142 aa12.2□□□□□ -0.46
HOXD3-204ENST00000459979 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
HOXD3-204ENST00000459979 NAT8BQ9UHF3 227 aa12.2□□□□□ -0.46
HOXD3-204ENST00000459979 RIGQ13278 110 aa12.19□□□□□ -0.46
HOXD3-204ENST00000459979 BAALCQ8WXS3 180 aa12.19□□□□□ -0.46
HOXD3-204ENST00000459979 C1orf43Q9BWL3 253 aa12.19□□□□□ -0.46
HOXD3-204ENST00000459979 SMIM27A0A1W2PRY6 76 aa12.18□□□□□ -0.46
HOXD3-204ENST00000459979 NCR2O95944 276 aa12.18□□□□□ -0.46
HOXD3-204ENST00000459979 RNF185Q96GF1 192 aa12.18□□□□□ -0.46
HOXD3-204ENST00000459979 VPS13BQ7Z7G8 4022 aa12.18□□□□□ -0.46
HOXD3-204ENST00000459979 SDHAF1A6NFY7 115 aa12.17□□□□□ -0.46
HOXD3-204ENST00000459979 RAB4AP20338 218 aa12.17□□□□□ -0.46
HOXD3-204ENST00000459979 AMTP48728 403 aa12.17□□□□□ -0.46
HOXD3-204ENST00000459979 RAB14P61106 215 aa12.17□□□□□ -0.46
HOXD3-204ENST00000459979 LINC00269Q8N2A0 174 aa12.17□□□□□ -0.46
HOXD3-204ENST00000459979 C20orf203Q8NBC4 194 aa12.17□□□□□ -0.46
HOXD3-204ENST00000459979 LECT2O14960 151 aa12.16□□□□□ -0.46
HOXD3-204ENST00000459979 MRAP2Q96G30 205 aa12.16□□□□□ -0.46
HOXD3-204ENST00000459979 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
HOXD3-204ENST00000459979 H7C423 109 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 I3L3M4 83 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 UBE2L6O14933 153 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 GAS8-AS1O95177 125 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 REG3AQ06141 175 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
HOXD3-204ENST00000459979 IGLV4-60A0A075B6I1 120 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 A0A1B0GW15 77 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
HOXD3-204ENST00000459979 CLLU1Q5K131 121 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 MYCBP2O75592 4640 aa12.13□□□□□ -0.47
HOXD3-204ENST00000459979 C14orf177Q52M58 125 aa12.12□□□□□ -0.47
HOXD3-204ENST00000459979 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 FAM229AH3BQW9 127 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 PPP1R17O96001 155 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 APCSP02743 223 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 PMCHP20382 165 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
HOXD3-204ENST00000459979 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
HOXD3-204ENST00000459979 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.1□□□□□ -0.47
HOXD3-204ENST00000459979 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
HOXD3-204ENST00000459979 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
HOXD3-204ENST00000459979 TSHBP01222 138 aa12.09□□□□□ -0.47
HOXD3-204ENST00000459979 ESDP10768 282 aa12.09□□□□□ -0.47
HOXD3-204ENST00000459979 NRACQ8N912 160 aa12.09□□□□□ -0.47
HOXD3-204ENST00000459979 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
HOXD3-204ENST00000459979 A0A1B0GXF2 115 aa12.08□□□□□ -0.48
HOXD3-204ENST00000459979 LINC00862A6NCI5 91 aa12.08□□□□□ -0.48
HOXD3-204ENST00000459979 USP17L23D6RBM5 183 aa12.08□□□□□ -0.48
HOXD3-204ENST00000459979 S100A8P05109 93 aa12.08□□□□□ -0.48
HOXD3-204ENST00000459979 IFITM2Q01629 132 aa12.08□□□□□ -0.48
HOXD3-204ENST00000459979 Q6ZSA8 131 aa12.08□□□□□ -0.48
HOXD3-204ENST00000459979 VCYO14598 125 aa12.07□□□□□ -0.48
HOXD3-204ENST00000459979 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
HOXD3-204ENST00000459979 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
HOXD3-204ENST00000459979 CAMPP49913 170 aa12.07□□□□□ -0.48
HOXD3-204ENST00000459979 MRPL51Q4U2R6 128 aaKnown RBP12.07□□□□□ -0.48
HOXD3-204ENST00000459979 SRRM2Q9UQ35 2752 aaKnown RBP12.06□□□□□ -0.48
HOXD3-204ENST00000459979 TRBV24-1A0A075B6N3 115 aa12.06□□□□□ -0.48
HOXD3-204ENST00000459979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
HOXD3-204ENST00000459979 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
HOXD3-204ENST00000459979 SMKR1H3BMG3 65 aa12.06□□□□□ -0.48
HOXD3-204ENST00000459979 FGF6P10767 208 aa12.06□□□□□ -0.48
HOXD3-204ENST00000459979 SUMO2P61956 95 aaKnown RBP12.06□□□□□ -0.48
HOXD3-204ENST00000459979 HBBP68871 147 aa12.06□□□□□ -0.48
HOXD3-204ENST00000459979 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
HOXD3-204ENST00000459979 TMEM242Q9NWH2 141 aa12.06□□□□□ -0.48
HOXD3-204ENST00000459979 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
HOXD3-204ENST00000459979 ATP5L2Q7Z4Y8 100 aa12.05□□□□□ -0.48
HOXD3-204ENST00000459979 F8W036 122 aa12.04□□□□□ -0.48
HOXD3-204ENST00000459979 PRSS1P07477 247 aa12.04□□□□□ -0.48
HOXD3-204ENST00000459979 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
HOXD3-204ENST00000459979 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
HOXD3-204ENST00000459979 MRPL54Q6P161 138 aaKnown RBP12.04□□□□□ -0.48
HOXD3-204ENST00000459979 MRPL52Q86TS9 123 aaKnown RBP12.04□□□□□ -0.48
HOXD3-204ENST00000459979 CLRN3Q8NCR9 226 aa12.04□□□□□ -0.48
HOXD3-204ENST00000459979 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
HOXD3-204ENST00000459979 C20orf78Q9BR46 151 aa12.04□□□□□ -0.48
HOXD3-204ENST00000459979 J3QL48 77 aa12.03□□□□□ -0.48
HOXD3-204ENST00000459979 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms