RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SSTP61278 116 aa6.53□□□□□ -1.36
HDLBP-228ENST00000459788 COTL1Q14019 142 aa6.53□□□□□ -1.36
HDLBP-228ENST00000459788 TWIST1Q15672 202 aa6.53□□□□□ -1.36
HDLBP-228ENST00000459788 KRTAP26-1Q6PEX3 210 aa6.53□□□□□ -1.36
HDLBP-228ENST00000459788 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
HDLBP-228ENST00000459788 GFRA4Q9GZZ7 299 aa6.53□□□□□ -1.36
HDLBP-228ENST00000459788 USP17L23D6RBM5 183 aa6.52□□□□□ -1.37
HDLBP-228ENST00000459788 UBE2L6O14933 153 aa6.52□□□□□ -1.37
HDLBP-228ENST00000459788 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
HDLBP-228ENST00000459788 REG3AQ06141 175 aa6.52□□□□□ -1.37
HDLBP-228ENST00000459788 GAGE6Q13070 117 aa6.52□□□□□ -1.37
HDLBP-228ENST00000459788 ALKAL2Q6UX46 152 aa6.52□□□□□ -1.37
HDLBP-228ENST00000459788 LINC00269Q8N2A0 174 aa6.52□□□□□ -1.37
HDLBP-228ENST00000459788 RNASE7Q9H1E1 156 aaKnown RBP6.52□□□□□ -1.37
HDLBP-228ENST00000459788 LINC00528Q8N1L1 170 aa6.51□□□□□ -1.37
HDLBP-228ENST00000459788 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
HDLBP-228ENST00000459788 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
HDLBP-228ENST00000459788 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
HDLBP-228ENST00000459788 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
HDLBP-228ENST00000459788 TRBV6-5A0A0K0K1A5 114 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 AMTP48728 403 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 CNBPP62633 177 aaKnown RBP6.5□□□□□ -1.37
HDLBP-228ENST00000459788 FAM74A3Q4VXF1 159 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 SCXQ7RTU7 201 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 GATD1Q8NB37 220 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 DEFB104AQ8WTQ1 72 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 OSTCQ9NRP0 149 aa6.5□□□□□ -1.37
HDLBP-228ENST00000459788 PRSS1P07477 247 aa6.49□□□□□ -1.37
HDLBP-228ENST00000459788 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
HDLBP-228ENST00000459788 LINC01551Q86U37 167 aa6.49□□□□□ -1.37
HDLBP-228ENST00000459788 TSKUQ8WUA8 353 aa6.49□□□□□ -1.37
HDLBP-228ENST00000459788 EIF5A2Q9GZV4 153 aaKnown RBP6.49□□□□□ -1.37
HDLBP-228ENST00000459788 TMEM191AQ9H0A3 160 aa6.49□□□□□ -1.37
HDLBP-228ENST00000459788 SMDT1Q9H4I9 107 aa6.49□□□□□ -1.37
HDLBP-228ENST00000459788 HERC1Q15751 4861 aa6.48□□□□□ -1.37
HDLBP-228ENST00000459788 A0A1B0GUT8 65 aa6.48□□□□□ -1.37
HDLBP-228ENST00000459788 PPP1R17O96001 155 aa6.48□□□□□ -1.37
HDLBP-228ENST00000459788 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
HDLBP-228ENST00000459788 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
HDLBP-228ENST00000459788 IGLV4-60A0A075B6I1 120 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.47□□□□□ -1.37
HDLBP-228ENST00000459788 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 ZNF727A8MUV8 499 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 I3L3M4 83 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 APCSP02743 223 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 HAMPP81172 84 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 MRAP2Q96G30 205 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 RNF185Q96GF1 192 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
HDLBP-228ENST00000459788 hCG_2014768A0A024R1R8 64 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.38
HDLBP-228ENST00000459788 SRP19P09132 144 aaKnown RBP6.46□□□□□ -1.38
HDLBP-228ENST00000459788 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
HDLBP-228ENST00000459788 LINC01620Q4KN68 170 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 AMMECR1LQ6DCA0 310 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
HDLBP-228ENST00000459788 TRAV26-2A0A0B4J265 109 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 TRBV27A0A0K0K1C4 114 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 A0A1B0GW15 77 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 PMCHP20382 165 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 POLR2KP53803 58 aaKnown RBP6.45□□□□□ -1.38
HDLBP-228ENST00000459788 RIGQ13278 110 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 TMEM241Q24JQ0 296 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
HDLBP-228ENST00000459788 ST20Q9HBF5 79 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 PKIGQ9Y2B9 76 aa6.45□□□□□ -1.38
HDLBP-228ENST00000459788 IGLV10-54A0A075B6I4 117 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 IGHV3-64A0A075B6Q5 118 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 hDV102S1A0JD36 115 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 CCL25O15444 150 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 FGF6P10767 208 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 ESDP10768 282 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 CEBPGP53567 150 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
HDLBP-228ENST00000459788 MRPL52Q86TS9 123 aaKnown RBP6.44□□□□□ -1.38
HDLBP-228ENST00000459788 OR5A1Q8NGJ0 315 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 ISOC2Q96AB3 205 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 TMEM101Q96IK0 257 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 BTF3L4Q96K17 158 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 V9GYV3 84 aa6.44□□□□□ -1.38
HDLBP-228ENST00000459788 PPP1R2P9O14990 202 aa6.43□□□□□ -1.38
HDLBP-228ENST00000459788 TCAPO15273 167 aa6.43□□□□□ -1.38
HDLBP-228ENST00000459788 OXTP01178 125 aa6.43□□□□□ -1.38
HDLBP-228ENST00000459788 RAB4AP20338 218 aa6.43□□□□□ -1.38
HDLBP-228ENST00000459788 PEA15Q15121 130 aa6.43□□□□□ -1.38
HDLBP-228ENST00000459788 RNASEKQ6P5S7 137 aaKnown RBP6.43□□□□□ -1.38
HDLBP-228ENST00000459788 NAT8Q9UHE5 227 aa6.43□□□□□ -1.38
HDLBP-228ENST00000459788 CSDC2Q9Y534 153 aaKnown RBP6.43□□□□□ -1.38
HDLBP-228ENST00000459788 GVQW2A0A096LPI5 108 aaPredicted RBP6.42□□□□□ -1.38
HDLBP-228ENST00000459788 LINC00862A6NCI5 91 aa6.42□□□□□ -1.38
HDLBP-228ENST00000459788 J3QL48 77 aa6.42□□□□□ -1.38
HDLBP-228ENST00000459788 VCYO14598 125 aa6.42□□□□□ -1.38
HDLBP-228ENST00000459788 C15orf56Q8N910 161 aa6.42□□□□□ -1.38
HDLBP-228ENST00000459788 NUP35Q8NFH5 326 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms