RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 SLURP1P55000 103 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 TMEM61Q8N0U2 210 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 LINC01587Q99440 93 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 MTORP42345 2549 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 IGHV1-58A0A0C4DH39 117 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 LOC107984156A0A0G2JMH3 177 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 A0A0J9YXY3 114 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 APOMO95445 188 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 IFITM1P13164 125 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 KHDC1LQ5JSQ8 128 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 CFAP126Q5VTH2 177 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 ARL17AQ8IVW1 177 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 KLHL30-AS1Q8NEE0 82 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 NRGNQ92686 78 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 FAM110AQ9BQ89 295 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 SPANXDQ9BXN6 97 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 SPANXCQ9NY87 97 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
HDAC3-202ENST00000459727 EMP1P54849 157 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 TIRAPP58753 221 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 WFDC2Q14508 124 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 C21orf62-AS1Q17RA5 79 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 STHQ8IWL8 128 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 PPDPFLQ8WWR9 84 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 Q96MF0 132 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 SPATA25Q9BR10 227 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 GEMIN7Q9H840 131 aaKnown RBP6.46□□□□□ -1.38
HDAC3-202ENST00000459727 ERG28Q9UKR5 140 aa6.46□□□□□ -1.38
HDAC3-202ENST00000459727 CSDC2Q9Y534 153 aaKnown RBP6.46□□□□□ -1.38
HDAC3-202ENST00000459727 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 CFC1P0CG37 223 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 RBMY1A1P0DJD3 496 aaKnown RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 RBMY1CP0DJD4 496 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 SCGB1C2P0DMR2 95 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 PSMB2P49721 201 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 HERVK_113P63121 156 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 DAZ2Q13117 558 aaKnown RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 FHL3Q13643 280 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 CIRBPQ14011 172 aaKnown RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 RBMY1FQ15415 496 aaKnown RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 TEN1Q86WV5 123 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 SBSPONQ8IVN8 264 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 C11orf72Q8NBR9 251 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 DAZ3Q9NR90 486 aaKnown RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 UBE2D4Q9Y2X8 147 aa6.45□□□□□ -1.38
HDAC3-202ENST00000459727 HRNRQ86YZ3 2850 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-202ENST00000459727 MUC4Q99102 2169 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 IGLV5-45A0A087WSX0 123 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 A4D1N5 150 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 RBMY1BA6NDE4 496 aaKnown RBP6.44□□□□□ -1.38
HDAC3-202ENST00000459727 GAGE12HA6NDE8 117 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 RBMY1EA6NEQ0 496 aaKnown RBP6.44□□□□□ -1.38
HDAC3-202ENST00000459727 TMEM262E9PQX1 116 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 H7C423 109 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 COX6CP09669 75 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 RBMY1DP0C7P1 496 aaKnown RBP6.44□□□□□ -1.38
HDAC3-202ENST00000459727 IGHV3-30-3P0DP02 117 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 RPL36AP83881 106 aaKnown RBP6.44□□□□□ -1.38
HDAC3-202ENST00000459727 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 DGAT2L7PQ6IED9 249 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 IL17DQ8TAD2 202 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
HDAC3-202ENST00000459727 VSIG2Q96IQ7 327 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 APCP25054 2843 aa6.44□□□□□ -1.38
HDAC3-202ENST00000459727 HIVEP1P15822 2718 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 TRAV4A0A0B4J268 109 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 IGHV3-33P01772 117 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 HTN1P15515 57 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 ATXN8Q156A1 80 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 MIAQ16674 131 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 DEFB136Q30KP8 78 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 ZFAND6Q6FIF0 208 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 MAPK1IP1LQ8NDC0 245 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 TMEM263Q8WUH6 116 aaKnown RBP6.43□□□□□ -1.38
HDAC3-202ENST00000459727 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
HDAC3-202ENST00000459727 TSSC4Q9Y5U2 329 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-202ENST00000459727 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
HDAC3-202ENST00000459727 CCL24O00175 119 aa6.42□□□□□ -1.38
HDAC3-202ENST00000459727 FOXI1Q12951 378 aa6.42□□□□□ -1.38
HDAC3-202ENST00000459727 Q6ZSV7 163 aa6.42□□□□□ -1.38
HDAC3-202ENST00000459727 MTURNQ8N3F0 131 aa6.42□□□□□ -1.38
HDAC3-202ENST00000459727 C16orf95Q9H693 158 aa6.42□□□□□ -1.38
HDAC3-202ENST00000459727 PRRC2AP48634 2157 aaKnown RBP6.41□□□□□ -1.38
HDAC3-202ENST00000459727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.41□□□□□ -1.382e-6■■■■□ 23.5
HDAC3-202ENST00000459727 IGHV3-73A0A0B4J1V6 119 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 DNAJC9-AS1A6NH13 148 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 K7EQD1 137 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 NDUFA1O15239 70 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms