RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
PKNOX1-204ENST00000456957 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-204ENST00000456957 AMTP48728 403 aa11.07□□□□□ -0.64
PKNOX1-204ENST00000456957 Q8N8P6 123 aa11.07□□□□□ -0.64
PKNOX1-204ENST00000456957 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
PKNOX1-204ENST00000456957 TCAPO15273 167 aa11.06□□□□□ -0.64
PKNOX1-204ENST00000456957 FCER1GP30273 86 aa11.06□□□□□ -0.64
PKNOX1-204ENST00000456957 CHCHD7Q9BUK0 85 aa11.06□□□□□ -0.64
PKNOX1-204ENST00000456957 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-204ENST00000456957 LYSTQ99698 3801 aa11.06□□□□□ -0.64
PKNOX1-204ENST00000456957 LY6G6CO95867 125 aa11.05□□□□□ -0.64
PKNOX1-204ENST00000456957 CHCHD5Q9BSY4 110 aa11.05□□□□□ -0.64
PKNOX1-204ENST00000456957 TMEM243Q9BU79 118 aa11.05□□□□□ -0.64
PKNOX1-204ENST00000456957 ESDP10768 282 aa11.04□□□□□ -0.64
PKNOX1-204ENST00000456957 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
PKNOX1-204ENST00000456957 VPS13DQ5THJ4 4388 aa11.03□□□□□ -0.64
PKNOX1-204ENST00000456957 SIVA1O15304 175 aa11.03□□□□□ -0.64
PKNOX1-204ENST00000456957 NIT1Q86X76 327 aa11.03□□□□□ -0.64
PKNOX1-204ENST00000456957 Q8N3U1 123 aa11.03□□□□□ -0.64
PKNOX1-204ENST00000456957 Q9H8V8 135 aa11.03□□□□□ -0.64
PKNOX1-204ENST00000456957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.02□□□□□ -0.65
PKNOX1-204ENST00000456957 IGKV2-29A2NJV5 120 aaPredicted RBP11.02□□□□□ -0.65
PKNOX1-204ENST00000456957 GAGE6Q13070 117 aa11.02□□□□□ -0.65
PKNOX1-204ENST00000456957 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.65
PKNOX1-204ENST00000456957 LCE6AA0A183 80 aa11.01□□□□□ -0.65
PKNOX1-204ENST00000456957 LINC01546A6NGU7 62 aa11.01□□□□□ -0.65
PKNOX1-204ENST00000456957 K7EMI3 77 aa11.01□□□□□ -0.65
PKNOX1-204ENST00000456957 DNAH10OSP0CZ25 163 aa11.01□□□□□ -0.65
PKNOX1-204ENST00000456957 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
PKNOX1-204ENST00000456957 DNAH1Q9P2D7 4330 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 UBE2L6O14933 153 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BKO60814 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BJP06899 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BOP23527 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BBP33778 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BDP58876 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BCP62807 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 Q0VG73 95 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 LAGE3Q14657 143 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 MPV17L2Q567V2 206 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
PKNOX1-204ENST00000456957 C20orf203Q8NBC4 194 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
PKNOX1-204ENST00000456957 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
PKNOX1-204ENST00000456957 H7C423 109 aa10.99□□□□□ -0.65
PKNOX1-204ENST00000456957 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
PKNOX1-204ENST00000456957 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
PKNOX1-204ENST00000456957 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
PKNOX1-204ENST00000456957 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
PKNOX1-204ENST00000456957 A0A087WX48 190 aa10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 C1orf196B1AJZ1 125 aa10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 LINC00614P0C842 121 aa10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 PKIAP61925 76 aa10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 AP5S1Q9NUS5 200 aa10.98□□□□□ -0.65
PKNOX1-204ENST00000456957 FGF6P10767 208 aa10.97□□□□□ -0.65
PKNOX1-204ENST00000456957 RAB5BP61020 215 aa10.97□□□□□ -0.65
PKNOX1-204ENST00000456957 RBX1P62877 108 aa10.97□□□□□ -0.65
PKNOX1-204ENST00000456957 BAGE3Q86Y29 109 aa10.97□□□□□ -0.65
PKNOX1-204ENST00000456957 Q8N976 141 aa10.97□□□□□ -0.65
PKNOX1-204ENST00000456957 KRTAP1-5Q9BYS1 174 aa10.97□□□□□ -0.65
PKNOX1-204ENST00000456957 LINC00310P59036 64 aa10.96□□□□□ -0.65
PKNOX1-204ENST00000456957 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.65
PKNOX1-204ENST00000456957 TMEM18Q96B42 140 aa10.96□□□□□ -0.65
PKNOX1-204ENST00000456957 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.65
PKNOX1-204ENST00000456957 SACSQ9NZJ4 4579 aa10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 NBDYA0A0U1RRE5 68 aa10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 A0A1B0GUV1 79 aa10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 MRPL52Q86TS9 123 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 CHCHD1Q96BP2 118 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-204ENST00000456957 IGLV4-60A0A075B6I1 120 aa10.94□□□□□ -0.66
PKNOX1-204ENST00000456957 SERF1AO75920 110 aa10.94□□□□□ -0.66
PKNOX1-204ENST00000456957 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-204ENST00000456957 PMCHL1Q16048 86 aa10.94□□□□□ -0.66
PKNOX1-204ENST00000456957 CYSLTR1Q9Y271 337 aa10.94□□□□□ -0.66
PKNOX1-204ENST00000456957 A0A096LNJ9 63 aa10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 M0R2N4 97 aa10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 TTC32Q5I0X7 151 aa10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
PKNOX1-204ENST00000456957 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 TRAV9-2A0A087WT02 112 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 K7EP13 123 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 G0S2P27469 103 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 SMAGPQ0VAQ4 97 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 Q6ZR54 194 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 C10orf126Q8N4M7 172 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 TMEM101Q96IK0 257 aa10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms