RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CASC10Q5T4H9 136 aa11.44□□□□□ -0.58
CCDC90B-202ENST00000455220 NTM-AS1Q6ZSK4 140 aa11.44□□□□□ -0.58
CCDC90B-202ENST00000455220 TCAPO15273 167 aa11.43□□□□□ -0.58
CCDC90B-202ENST00000455220 PRSS3P2Q8NHM4 247 aa11.43□□□□□ -0.58
CCDC90B-202ENST00000455220 URB1-AS1Q96HZ7 61 aa11.43□□□□□ -0.58
CCDC90B-202ENST00000455220 VPS13DQ5THJ4 4388 aa11.43□□□□□ -0.58
CCDC90B-202ENST00000455220 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
CCDC90B-202ENST00000455220 K7EMI3 77 aa11.42□□□□□ -0.58
CCDC90B-202ENST00000455220 LELP1Q5T871 98 aa11.41□□□□□ -0.58
CCDC90B-202ENST00000455220 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
CCDC90B-202ENST00000455220 FCER1GP30273 86 aa11.41□□□□□ -0.58
CCDC90B-202ENST00000455220 TRBV25-1A0A075B6N4 114 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 LINC00614P0C842 121 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 ESDP10768 282 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 RAB5BP61020 215 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 FA2HQ7L5A8 372 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 NIT1Q86X76 327 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 CHCHD7Q9BUK0 85 aa11.4□□□□□ -0.58
CCDC90B-202ENST00000455220 AMTP48728 403 aa11.39□□□□□ -0.59
CCDC90B-202ENST00000455220 CCL18P55774 89 aa11.39□□□□□ -0.59
CCDC90B-202ENST00000455220 BAGE3Q86Y29 109 aa11.39□□□□□ -0.59
CCDC90B-202ENST00000455220 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
CCDC90B-202ENST00000455220 LINC00588Q9Y4M8 146 aa11.39□□□□□ -0.59
CCDC90B-202ENST00000455220 LINC00310P59036 64 aa11.38□□□□□ -0.59
CCDC90B-202ENST00000455220 LAGE3Q14657 143 aa11.38□□□□□ -0.59
CCDC90B-202ENST00000455220 ORMDL2Q53FV1 153 aa11.38□□□□□ -0.59
CCDC90B-202ENST00000455220 CHCHD1Q96BP2 118 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-202ENST00000455220 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-202ENST00000455220 DNAH1Q9P2D7 4330 aa11.38□□□□□ -0.59
CCDC90B-202ENST00000455220 TMEM243Q9BU79 118 aa11.37□□□□□ -0.59
CCDC90B-202ENST00000455220 ALMS1Q8TCU4 4167 aa11.37□□□□□ -0.59
CCDC90B-202ENST00000455220 COA6Q5JTJ3 125 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-202ENST00000455220 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-202ENST00000455220 C20orf203Q8NBC4 194 aa11.37□□□□□ -0.59
CCDC90B-202ENST00000455220 UPK3BQ9BT76 320 aa11.37□□□□□ -0.59
CCDC90B-202ENST00000455220 SERF1AO75920 110 aa11.36□□□□□ -0.59
CCDC90B-202ENST00000455220 TRAV8-6A0A0B4J262 113 aa11.35□□□□□ -0.59
CCDC90B-202ENST00000455220 H7C423 109 aa11.35□□□□□ -0.59
CCDC90B-202ENST00000455220 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
CCDC90B-202ENST00000455220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 A0A096LNJ9 63 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 NUPR1O60356 82 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 WFDC10BQ8IUB3 73 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 G0S2P27469 103 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 NDUFA6P56556 154 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 TMEM18Q96B42 140 aa11.33□□□□□ -0.6
CCDC90B-202ENST00000455220 UBE2L6O14933 153 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 HSBP1O75506 76 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 PKIAP61925 76 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 RPL39P62891 51 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 GAGE6Q13070 117 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 LGALS9CQ6DKI2 356 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 TOMM6Q96B49 74 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
CCDC90B-202ENST00000455220 KMT2CQ8NEZ4 4911 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-202ENST00000455220 HBDP02042 147 aa11.31□□□□□ -0.6
CCDC90B-202ENST00000455220 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-202ENST00000455220 MRPL52Q86TS9 123 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-202ENST00000455220 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
CCDC90B-202ENST00000455220 SACSQ9NZJ4 4579 aa11.31□□□□□ -0.6
CCDC90B-202ENST00000455220 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
CCDC90B-202ENST00000455220 FGF6P10767 208 aa11.3□□□□□ -0.6
CCDC90B-202ENST00000455220 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
CCDC90B-202ENST00000455220 TIMM21Q9BVV7 248 aa11.3□□□□□ -0.6
CCDC90B-202ENST00000455220 UBE2D4Q9Y2X8 147 aa11.3□□□□□ -0.6
CCDC90B-202ENST00000455220 A0A1B0GUV1 79 aa11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 SIVA1O15304 175 aa11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 DNAH10OSP0CZ25 163 aa11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 CSDC2Q9Y534 153 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-202ENST00000455220 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 RBX1P62877 108 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 SMAGPQ0VAQ4 97 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 Q9H8V8 135 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 SPANXA1Q9NS26 97 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 PYGO1Q9Y3Y4 419 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 A0A087WX48 190 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 Q8N3U1 123 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 LINC00476Q8WZB0 136 aa11.28□□□□□ -0.6
CCDC90B-202ENST00000455220 KMT2AQ03164 3969 aa11.27□□□□□ -0.61
CCDC90B-202ENST00000455220 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
CCDC90B-202ENST00000455220 S100A6P06703 90 aa11.27□□□□□ -0.61
CCDC90B-202ENST00000455220 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.61
CCDC90B-202ENST00000455220 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
CCDC90B-202ENST00000455220 NPSP0C0P6 89 aa11.26□□□□□ -0.61
CCDC90B-202ENST00000455220 Q8N976 141 aa11.26□□□□□ -0.61
CCDC90B-202ENST00000455220 FAM104AQ969W3 186 aa11.26□□□□□ -0.61
CCDC90B-202ENST00000455220 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
CCDC90B-202ENST00000455220 ERASQ7Z444 233 aa11.25□□□□□ -0.61
CCDC90B-202ENST00000455220 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
CCDC90B-202ENST00000455220 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
CCDC90B-202ENST00000455220 IGHV3-30P01768 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms