RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 NIT2Q9NQR4 276 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 P01737 135 aa10.17□□□□□ -0.78
GPC1-206ENST00000455111 EIF5AP63241 154 aaKnown RBP10.17□□□□□ -0.78
GPC1-206ENST00000455111 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.17□□□□□ -0.78
GPC1-206ENST00000455111 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
GPC1-206ENST00000455111 SMIM12Q96EX1 92 aa10.17□□□□□ -0.78
GPC1-206ENST00000455111 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 H7C1H1 209 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 BCL2P10415 239 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 Q6ZNX1 250 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 SPACA4Q8TDM5 124 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 GTSF1Q8WW33 167 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 RPL39LQ96EH5 51 aaKnown RBP10.16□□□□□ -0.78
GPC1-206ENST00000455111 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
GPC1-206ENST00000455111 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
GPC1-206ENST00000455111 A0A087WYN8 130 aa10.15□□□□□ -0.78
GPC1-206ENST00000455111 F2Z2F3 143 aa10.15□□□□□ -0.78
GPC1-206ENST00000455111 GAS8-AS1O95177 125 aa10.15□□□□□ -0.78
GPC1-206ENST00000455111 IFNA1P01562 189 aa10.15□□□□□ -0.78
GPC1-206ENST00000455111 OCC1Q8TAD7 63 aa10.15□□□□□ -0.78
GPC1-206ENST00000455111 PDE6DO43924 150 aa10.14□□□□□ -0.79
GPC1-206ENST00000455111 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
GPC1-206ENST00000455111 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
GPC1-206ENST00000455111 GAGE12HA6NDE8 117 aa10.13□□□□□ -0.79
GPC1-206ENST00000455111 AMTP48728 403 aa10.13□□□□□ -0.79
GPC1-206ENST00000455111 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
GPC1-206ENST00000455111 RPP21Q9H633 154 aaKnown RBP10.12□□□□□ -0.79
GPC1-206ENST00000455111 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
GPC1-206ENST00000455111 IGKV2-29A2NJV5 120 aaPredicted RBP10.11□□□□□ -0.79
GPC1-206ENST00000455111 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 COTL1Q14019 142 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 TWIST1Q15672 202 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 TCTE3Q8IZS6 198 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 PRSS3P2Q8NHM4 247 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 PLAC8Q9NZF1 115 aa10.11□□□□□ -0.79
GPC1-206ENST00000455111 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
GPC1-206ENST00000455111 ODF1Q14990 250 aa10.1□□□□□ -0.79
GPC1-206ENST00000455111 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
GPC1-206ENST00000455111 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
GPC1-206ENST00000455111 PHOX2AO14813 284 aa10.09□□□□□ -0.79
GPC1-206ENST00000455111 COX6A2Q02221 97 aa10.09□□□□□ -0.79
GPC1-206ENST00000455111 FOXI1Q12951 378 aa10.08□□□□□ -0.8
GPC1-206ENST00000455111 Q6ZRU5 148 aa10.08□□□□□ -0.8
GPC1-206ENST00000455111 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
GPC1-206ENST00000455111 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
GPC1-206ENST00000455111 LRP2P98164 4655 aa10.08□□□□□ -0.8
GPC1-206ENST00000455111 UBE2L6O14933 153 aa10.07□□□□□ -0.8
GPC1-206ENST00000455111 EIF5AL1Q6IS14 154 aaKnown RBP10.07□□□□□ -0.8
GPC1-206ENST00000455111 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
GPC1-206ENST00000455111 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
GPC1-206ENST00000455111 SDHAF1A6NFY7 115 aa10.06□□□□□ -0.8
GPC1-206ENST00000455111 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
GPC1-206ENST00000455111 FGF6P10767 208 aa10.06□□□□□ -0.8
GPC1-206ENST00000455111 ESDP10768 282 aa10.06□□□□□ -0.8
GPC1-206ENST00000455111 BIN3Q9NQY0 253 aa10.06□□□□□ -0.8
GPC1-206ENST00000455111 AP5S1Q9NUS5 200 aa10.06□□□□□ -0.8
GPC1-206ENST00000455111 A0A096LNI7 61 aa10.05□□□□□ -0.8
GPC1-206ENST00000455111 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.05□□□□□ -0.8
GPC1-206ENST00000455111 TSHBP01222 138 aa10.05□□□□□ -0.8
GPC1-206ENST00000455111 FAM231DQ6ZW35 169 aa10.05□□□□□ -0.8
GPC1-206ENST00000455111 LYPD6BQ8NI32 183 aa10.05□□□□□ -0.8
GPC1-206ENST00000455111 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
GPC1-206ENST00000455111 RNF213Q63HN8 5207 aa10.04□□□□□ -0.8
GPC1-206ENST00000455111 TRBV6-5A0A0K0K1A5 114 aa10.04□□□□□ -0.8
GPC1-206ENST00000455111 NCR2O95944 276 aa10.04□□□□□ -0.8
GPC1-206ENST00000455111 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
GPC1-206ENST00000455111 IGKV2-24A0A0C4DH68 120 aa10.03□□□□□ -0.8
GPC1-206ENST00000455111 GATCO43716 136 aaKnown RBP10.03□□□□□ -0.8
GPC1-206ENST00000455111 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
GPC1-206ENST00000455111 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
GPC1-206ENST00000455111 APCSP02743 223 aa10.02□□□□□ -0.81
GPC1-206ENST00000455111 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
GPC1-206ENST00000455111 ALKAL2Q6UX46 152 aa10.02□□□□□ -0.81
GPC1-206ENST00000455111 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
GPC1-206ENST00000455111 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
GPC1-206ENST00000455111 LINC00959A0A1B0GUT2 108 aa10.01□□□□□ -0.81
GPC1-206ENST00000455111 TMEM250H0YL14 139 aa10.01□□□□□ -0.81
GPC1-206ENST00000455111 H7C423 109 aa10.01□□□□□ -0.81
GPC1-206ENST00000455111 POLR2KP53803 58 aaKnown RBP10.01□□□□□ -0.81
GPC1-206ENST00000455111 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
GPC1-206ENST00000455111 AMMECR1LQ6DCA0 310 aa10.01□□□□□ -0.81
GPC1-206ENST00000455111 DPH3Q96FX2 82 aa10.01□□□□□ -0.81
GPC1-206ENST00000455111 I3L3M4 83 aa10□□□□□ -0.81
GPC1-206ENST00000455111 CCL25O15444 150 aa10□□□□□ -0.81
GPC1-206ENST00000455111 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
GPC1-206ENST00000455111 XCL1P47992 114 aa10□□□□□ -0.81
GPC1-206ENST00000455111 CFAP161Q6P656 301 aa10□□□□□ -0.81
GPC1-206ENST00000455111 STPG4Q8N801 248 aa10□□□□□ -0.81
GPC1-206ENST00000455111 CDC42SE2Q9NRR3 84 aa9.99□□□□□ -0.81
GPC1-206ENST00000455111 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
GPC1-206ENST00000455111 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
GPC1-206ENST00000455111 RAB4AP20338 218 aa9.98□□□□□ -0.81
GPC1-206ENST00000455111 CT83Q5H943 113 aa9.98□□□□□ -0.81
GPC1-206ENST00000455111 LINC01551Q86U37 167 aa9.98□□□□□ -0.81
GPC1-206ENST00000455111 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
GPC1-206ENST00000455111 A8MWL6 223 aa9.97□□□□□ -0.81
GPC1-206ENST00000455111 PMCHP20382 165 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms