RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MPV17L2Q567V2 206 aa18.79■□□□□ 0.6
SMARCC1-203ENST00000454240 I3L3M4 83 aa18.78■□□□□ 0.6
SMARCC1-203ENST00000454240 TMEM243Q9BU79 118 aa18.78■□□□□ 0.6
SMARCC1-203ENST00000454240 PMCHP20382 165 aa18.77■□□□□ 0.6
SMARCC1-203ENST00000454240 CKS2P33552 79 aa18.77■□□□□ 0.6
SMARCC1-203ENST00000454240 GAGE6Q13070 117 aa18.77■□□□□ 0.6
SMARCC1-203ENST00000454240 ELOBQ15370 118 aa18.77■□□□□ 0.6
SMARCC1-203ENST00000454240 ATRAIDQ6UW56 229 aa18.77■□□□□ 0.6
SMARCC1-203ENST00000454240 KLK12Q9UKR0 248 aa18.77■□□□□ 0.6
SMARCC1-203ENST00000454240 TRAV9-1A0A075B6T8 112 aa18.76■□□□□ 0.59
SMARCC1-203ENST00000454240 TRBV27A0A0K0K1C4 114 aa18.76■□□□□ 0.59
SMARCC1-203ENST00000454240 AMTP48728 403 aa18.76■□□□□ 0.59
SMARCC1-203ENST00000454240 Q9HAA7 133 aa18.76■□□□□ 0.59
SMARCC1-203ENST00000454240 TRBV24-1A0A075B6N3 115 aa18.75■□□□□ 0.59
SMARCC1-203ENST00000454240 APOC3P02656 99 aa18.75■□□□□ 0.59
SMARCC1-203ENST00000454240 RPS10P5Q9NQ39 176 aa18.75■□□□□ 0.59
SMARCC1-203ENST00000454240 TRAV8-3A0A0A6YYJ7 113 aa18.74■□□□□ 0.59
SMARCC1-203ENST00000454240 D6R8Y8 96 aa18.74■□□□□ 0.59
SMARCC1-203ENST00000454240 SUMO2P61956 95 aaKnown RBP18.74■□□□□ 0.59
SMARCC1-203ENST00000454240 Q8N976 141 aa18.74■□□□□ 0.59
SMARCC1-203ENST00000454240 PPBPP02775 128 aa18.73■□□□□ 0.59
SMARCC1-203ENST00000454240 RBX1P62877 108 aa18.73■□□□□ 0.59
SMARCC1-203ENST00000454240 NDUFA5Q16718 116 aa18.73■□□□□ 0.59
SMARCC1-203ENST00000454240 DNAH11Q96DT5 4516 aa18.72■□□□□ 0.59
SMARCC1-203ENST00000454240 VCYO14598 125 aa18.72■□□□□ 0.59
SMARCC1-203ENST00000454240 TSHBP01222 138 aa18.72■□□□□ 0.59
SMARCC1-203ENST00000454240 APCSP02743 223 aa18.72■□□□□ 0.59
SMARCC1-203ENST00000454240 S100PP25815 95 aa18.72■□□□□ 0.59
SMARCC1-203ENST00000454240 C20orf78Q9BR46 151 aa18.72■□□□□ 0.59
SMARCC1-203ENST00000454240 TNFRSF6BO95407 300 aa18.71■□□□□ 0.59
SMARCC1-203ENST00000454240 SVBPQ8N300 66 aa18.71■□□□□ 0.59
SMARCC1-203ENST00000454240 A0A1B0GUV1 79 aa18.7■□□□□ 0.58
SMARCC1-203ENST00000454240 ANGP03950 147 aaKnown RBP18.7■□□□□ 0.58
SMARCC1-203ENST00000454240 PHOX2AO14813 284 aa18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 UBE2L6O14933 153 aa18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 SNAPINO95295 136 aa18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 RPL32P62910 135 aaKnown RBP18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 TMEM136Q6ZRR5 245 aa18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 ORMDL3Q8N138 153 aa18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 UBE2WQ96B02 151 aa18.69■□□□□ 0.58
SMARCC1-203ENST00000454240 ESDP10768 282 aa18.68■□□□□ 0.58
SMARCC1-203ENST00000454240 ENHOQ6UWT2 76 aa18.68■□□□□ 0.58
SMARCC1-203ENST00000454240 SLC7A5P1Q8MH63 180 aa18.68■□□□□ 0.58
SMARCC1-203ENST00000454240 H7C423 109 aa18.67■□□□□ 0.58
SMARCC1-203ENST00000454240 NPYP01303 97 aa18.67■□□□□ 0.58
SMARCC1-203ENST00000454240 Q0VG73 95 aa18.67■□□□□ 0.58
SMARCC1-203ENST00000454240 TM2D2Q9BX73 214 aa18.67■□□□□ 0.58
SMARCC1-203ENST00000454240 C20orf203Q8NBC4 194 aa18.66■□□□□ 0.58
SMARCC1-203ENST00000454240 PRELID3AQ96N28 172 aa18.66■□□□□ 0.58
SMARCC1-203ENST00000454240 PRR34Q9NV39 138 aa18.66■□□□□ 0.58
SMARCC1-203ENST00000454240 IGLV4-60A0A075B6I1 120 aa18.65■□□□□ 0.58
SMARCC1-203ENST00000454240 PSCAO43653 123 aa18.65■□□□□ 0.58
SMARCC1-203ENST00000454240 KIR2DL4Q99706 377 aa18.65■□□□□ 0.58
SMARCC1-203ENST00000454240 PKHD1P08F94 4074 aa18.65■□□□□ 0.58
SMARCC1-203ENST00000454240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.64■□□□□ 0.57
SMARCC1-203ENST00000454240 IGKV2-29A2NJV5 120 aaPredicted RBP18.64■□□□□ 0.57
SMARCC1-203ENST00000454240 RMI2Q96E14 147 aa18.64■□□□□ 0.57
SMARCC1-203ENST00000454240 A0A087WTM6 91 aa18.63■□□□□ 0.57
SMARCC1-203ENST00000454240 LINC00269Q8N2A0 174 aa18.63■□□□□ 0.57
SMARCC1-203ENST00000454240 SMIM2Q9BVW6 85 aa18.63■□□□□ 0.57
SMARCC1-203ENST00000454240 LAMTOR2Q9Y2Q5 125 aa18.63■□□□□ 0.57
SMARCC1-203ENST00000454240 COX11Q9Y6N1 276 aa18.63■□□□□ 0.57
SMARCC1-203ENST00000454240 CRPP02741 224 aa18.62■□□□□ 0.57
SMARCC1-203ENST00000454240 FCER1GP30273 86 aa18.62■□□□□ 0.57
SMARCC1-203ENST00000454240 LRCOL1A6NCL2 159 aa18.61■□□□□ 0.57
SMARCC1-203ENST00000454240 PRSS47A8MTI9 375 aa18.61■□□□□ 0.57
SMARCC1-203ENST00000454240 GNB1LQ9BYB4 327 aa18.61■□□□□ 0.57
SMARCC1-203ENST00000454240 IGKV2D-24A0A075B6R9 120 aa18.6■□□□□ 0.57
SMARCC1-203ENST00000454240 FGF6P10767 208 aa18.6■□□□□ 0.57
SMARCC1-203ENST00000454240 MIAQ16674 131 aa18.6■□□□□ 0.57
SMARCC1-203ENST00000454240 HLA-DQA1P01909 254 aa18.59■□□□□ 0.57
SMARCC1-203ENST00000454240 REG3AQ06141 175 aa18.59■□□□□ 0.57
SMARCC1-203ENST00000454240 COX19Q49B96 90 aa18.59■□□□□ 0.57
SMARCC1-203ENST00000454240 AMMECR1LQ6DCA0 310 aa18.59■□□□□ 0.57
SMARCC1-203ENST00000454240 MAPKAPK5-AS1Q8N8E1 139 aa18.59■□□□□ 0.57
SMARCC1-203ENST00000454240 EREGO14944 169 aa18.58■□□□□ 0.56
SMARCC1-203ENST00000454240 TCAPO15273 167 aa18.58■□□□□ 0.56
SMARCC1-203ENST00000454240 CLPSL2Q6UWE3 100 aa18.58■□□□□ 0.56
SMARCC1-203ENST00000454240 BIRC6Q9NR09 4857 aa18.58■□□□□ 0.56
SMARCC1-203ENST00000454240 ZNF25P17030 456 aaPredicted RBP18.57■□□□□ 0.56
SMARCC1-203ENST00000454240 RNASEKQ6P5S7 137 aaKnown RBP18.57■□□□□ 0.56
SMARCC1-203ENST00000454240 SPATA12Q7Z6I5 190 aa18.57■□□□□ 0.56
SMARCC1-203ENST00000454240 C1orf43Q9BWL3 253 aa18.57■□□□□ 0.56
SMARCC1-203ENST00000454240 MRPL52Q86TS9 123 aaKnown RBP18.56■□□□□ 0.56
SMARCC1-203ENST00000454240 KRTAP10-2P60368 255 aa18.55■□□□□ 0.56
SMARCC1-203ENST00000454240 DYNC1H1Q14204 4646 aaKnown RBP18.55■□□□□ 0.56
SMARCC1-203ENST00000454240 TGIF2-C20orf24A0A0A6YYL0 155 aa18.54■□□□□ 0.56
SMARCC1-203ENST00000454240 KIAA1644Q3SXP7 199 aa18.54■□□□□ 0.56
SMARCC1-203ENST00000454240 MAP1LC3AQ9H492 121 aa18.54■□□□□ 0.56
SMARCC1-203ENST00000454240 LOC389332A0A1B0GUA5 103 aa18.52■□□□□ 0.56
SMARCC1-203ENST00000454240 MT-ND6P03923 174 aa18.52■□□□□ 0.56
SMARCC1-203ENST00000454240 KRTAP26-1Q6PEX3 210 aa18.52■□□□□ 0.56
SMARCC1-203ENST00000454240 TMEM101Q96IK0 257 aa18.52■□□□□ 0.56
SMARCC1-203ENST00000454240 TRAV8-4A0A0B4J246 113 aa18.51■□□□□ 0.55
SMARCC1-203ENST00000454240 WFDC2Q14508 124 aa18.51■□□□□ 0.55
SMARCC1-203ENST00000454240 OR5A1Q8NGJ0 315 aa18.5■□□□□ 0.55
SMARCC1-203ENST00000454240 BAALCQ8WXS3 180 aa18.5■□□□□ 0.55
SMARCC1-203ENST00000454240 TMEM18Q96B42 140 aa18.5■□□□□ 0.55
SMARCC1-203ENST00000454240 UBE2D4Q9Y2X8 147 aa18.5■□□□□ 0.55
SMARCC1-203ENST00000454240 CSDC2Q9Y534 153 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms