RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 NSUN5P1Q3KNT7 163 aa14.44□□□□□ -0.1
LMBR1-213ENST00000454132 TRBV6-5A0A0K0K1A5 114 aa14.43□□□□□ -0.1
LMBR1-213ENST00000454132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.43□□□□□ -0.1
LMBR1-213ENST00000454132 IGKV2-29A2NJV5 120 aaPredicted RBP14.43□□□□□ -0.1
LMBR1-213ENST00000454132 ID1P41134 155 aa14.43□□□□□ -0.1
LMBR1-213ENST00000454132 C9orf85Q96MD7 179 aa14.43□□□□□ -0.1
LMBR1-213ENST00000454132 FAM104AQ969W3 186 aa14.42□□□□□ -0.1
LMBR1-213ENST00000454132 ZANQ9Y493 2812 aa14.41□□□□□ -0.1
LMBR1-213ENST00000454132 IGHV1OR15-1A0A075B7D0 117 aa14.41□□□□□ -0.1
LMBR1-213ENST00000454132 TRBV30A0A0K0K1B3 111 aa14.41□□□□□ -0.1
LMBR1-213ENST00000454132 SPTBN4Q9H254 2564 aa14.41□□□□□ -0.1
LMBR1-213ENST00000454132 RHOHQ15669 191 aa14.41□□□□□ -0.1
LMBR1-213ENST00000454132 RPL13AP40429 203 aaKnown RBP14.4□□□□□ -0.1
LMBR1-213ENST00000454132 HERV-K104P63124 156 aa14.39□□□□□ -0.11
LMBR1-213ENST00000454132 USMG5Q96IX5 58 aa14.39□□□□□ -0.11
LMBR1-213ENST00000454132 USP9YO00507 2555 aaPredicted RBP14.38□□□□□ -0.11
LMBR1-213ENST00000454132 MEIG1Q5JSS6 88 aa14.38□□□□□ -0.11
LMBR1-213ENST00000454132 A0A0J9YX75 114 aa14.38□□□□□ -0.11
LMBR1-213ENST00000454132 IGHG2P01859 326 aa14.38□□□□□ -0.11
LMBR1-213ENST00000454132 SHISA2Q6UWI4 295 aa14.38□□□□□ -0.11
LMBR1-213ENST00000454132 Q6ZSN1 163 aa14.37□□□□□ -0.11
LMBR1-213ENST00000454132 RBMY1A1P0DJD3 496 aaKnown RBP14.37□□□□□ -0.11
LMBR1-213ENST00000454132 RBMY1CP0DJD4 496 aa14.37□□□□□ -0.11
LMBR1-213ENST00000454132 RBMY1FQ15415 496 aaKnown RBP14.37□□□□□ -0.11
LMBR1-213ENST00000454132 UTP20O75691 2785 aaKnown RBP14.37□□□□□ -0.11
LMBR1-213ENST00000454132 IGHV4-61A0A0C4DH41 118 aa14.36□□□□□ -0.11
LMBR1-213ENST00000454132 TRBV7-9A0A0J9YWB2 115 aa14.36□□□□□ -0.11
LMBR1-213ENST00000454132 COX6CP09669 75 aa14.36□□□□□ -0.11
LMBR1-213ENST00000454132 IGHV1-58A0A0C4DH39 117 aa14.36□□□□□ -0.11
LMBR1-213ENST00000454132 SYNJ2BPP57105 145 aa14.35□□□□□ -0.11
LMBR1-213ENST00000454132 TRGV11A0A075B6L2 103 aa14.35□□□□□ -0.11
LMBR1-213ENST00000454132 TNFRSF18Q9Y5U5 241 aa14.35□□□□□ -0.11
LMBR1-213ENST00000454132 HIST2H2BDQ6DRA6 164 aa14.34□□□□□ -0.11
LMBR1-213ENST00000454132 CENPEQ02224 2701 aa14.34□□□□□ -0.11
LMBR1-213ENST00000454132 C19orf84I3L1E1 186 aa14.34□□□□□ -0.11
LMBR1-213ENST00000454132 MIAQ16674 131 aa14.34□□□□□ -0.11
LMBR1-213ENST00000454132 VSIG2Q96IQ7 327 aa14.34□□□□□ -0.11
LMBR1-213ENST00000454132 SNRPD3P62318 126 aaKnown RBP14.33□□□□□ -0.12
LMBR1-213ENST00000454132 CDKN2A-AS1Q9UH64 79 aa14.33□□□□□ -0.12
LMBR1-213ENST00000454132 M0QXV9 152 aa14.33□□□□□ -0.12
LMBR1-213ENST00000454132 MRPS36P82909 103 aaKnown RBP14.33□□□□□ -0.12
LMBR1-213ENST00000454132 POLQO75417 2590 aa14.32□□□□□ -0.12
LMBR1-213ENST00000454132 TMEM61Q8N0U2 210 aa14.32□□□□□ -0.12
LMBR1-213ENST00000454132 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.31□□□□□ -0.12
LMBR1-213ENST00000454132 LINC00467Q9BRT7 94 aa14.31□□□□□ -0.12
LMBR1-213ENST00000454132 LST1O00453 97 aa14.31□□□□□ -0.12
LMBR1-213ENST00000454132 NDUFA7O95182 113 aa14.31□□□□□ -0.12
LMBR1-213ENST00000454132 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
LMBR1-213ENST00000454132 WNK1Q9H4A3 2382 aa14.3□□□□□ -0.12
LMBR1-213ENST00000454132 A6NDX4 124 aa14.29□□□□□ -0.12
LMBR1-213ENST00000454132 ITPR1Q14643 2758 aa14.29□□□□□ -0.12
LMBR1-213ENST00000454132 AVPP01185 164 aa14.29□□□□□ -0.12
LMBR1-213ENST00000454132 COX6A2Q02221 97 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 CITED2Q99967 270 aaPredicted RBP14.28□□□□□ -0.12
LMBR1-213ENST00000454132 MYO9AB2RTY4 2548 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 FAM236AA0A1B0GUQ0 79 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 FAM236BA0A1B0GV22 79 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 Q8N2B8 174 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 LY6DQ14210 128 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 SPANXDQ9BXN6 97 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 SPANXCQ9NY87 97 aa14.28□□□□□ -0.12
LMBR1-213ENST00000454132 H3BT86 120 aa14.27□□□□□ -0.12
LMBR1-213ENST00000454132 Q6Q795 121 aa14.27□□□□□ -0.12
LMBR1-213ENST00000454132 CHCHD7Q9BUK0 85 aa14.27□□□□□ -0.12
LMBR1-213ENST00000454132 K7EQG2 157 aa14.27□□□□□ -0.13
LMBR1-213ENST00000454132 KLRB1Q12918 225 aa14.27□□□□□ -0.13
LMBR1-213ENST00000454132 UBE2D4Q9Y2X8 147 aa14.27□□□□□ -0.13
LMBR1-213ENST00000454132 Q9H8V8 135 aa14.26□□□□□ -0.13
LMBR1-213ENST00000454132 TMEM101Q96IK0 257 aa14.25□□□□□ -0.13
LMBR1-213ENST00000454132 IGHV4-59P01825 116 aa14.25□□□□□ -0.13
LMBR1-213ENST00000454132 USP9XQ93008 2570 aaPredicted RBP14.25□□□□□ -0.13
LMBR1-213ENST00000454132 DEFB136Q30KP8 78 aa14.25□□□□□ -0.13
LMBR1-213ENST00000454132 SMCR5Q8TEV8 140 aa14.25□□□□□ -0.13
LMBR1-213ENST00000454132 MXRA5Q9NR99 2828 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 K7EMT4 169 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 DEFB131AP59861 70 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 PYGO1Q9Y3Y4 419 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 TINCRA0A1B0GVN0 87 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 RS1O15537 224 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 DGAT2L7PQ6IED9 249 aa14.24□□□□□ -0.13
LMBR1-213ENST00000454132 H3BUA1 57 aa14.23□□□□□ -0.13
LMBR1-213ENST00000454132 SETD2Q9BYW2 2564 aaPredicted RBP14.23□□□□□ -0.13
LMBR1-213ENST00000454132 CFHR3Q02985 330 aa14.23□□□□□ -0.13
LMBR1-213ENST00000454132 FLNCQ14315 2725 aa14.22□□□□□ -0.13
LMBR1-213ENST00000454132 IGHV4-30-2A0A087WSY4 118 aa14.21□□□□□ -0.13
LMBR1-213ENST00000454132 TRAV13-1A0A0B4J241 112 aa14.21□□□□□ -0.13
LMBR1-213ENST00000454132 HOXD3P31249 432 aaPredicted RBP14.21□□□□□ -0.13
LMBR1-213ENST00000454132 SOSTDC1Q6X4U4 206 aa14.21□□□□□ -0.13
LMBR1-213ENST00000454132 FBN2P35556 2912 aa14.21□□□□□ -0.14
LMBR1-213ENST00000454132 IGHV3OR16-12A0A075B7B8 117 aa14.21□□□□□ -0.14
LMBR1-213ENST00000454132 PSMB8P28062 276 aa14.21□□□□□ -0.14
LMBR1-213ENST00000454132 MAPK1IP1LQ8NDC0 245 aa14.21□□□□□ -0.14
LMBR1-213ENST00000454132 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.14
LMBR1-213ENST00000454132 C18orf65Q6ZTR6 163 aa14.2□□□□□ -0.14
LMBR1-213ENST00000454132 Q9HAA7 133 aa14.2□□□□□ -0.14
LMBR1-213ENST00000454132 BRI3O95415 125 aa14.19□□□□□ -0.14
LMBR1-213ENST00000454132 DAZ2Q13117 558 aaKnown RBP14.19□□□□□ -0.14
LMBR1-213ENST00000454132 DAZ4Q86SG3 579 aaKnown RBP14.19□□□□□ -0.14
LMBR1-213ENST00000454132 DAZ3Q9NR90 486 aaKnown RBP14.19□□□□□ -0.14
LMBR1-213ENST00000454132 YAE1D1Q9NRH1 226 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms