RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 Q6ZNX1 250 aa10.6□□□□□ -0.71
RPUSD3-209ENST00000451405 BIN3Q9NQY0 253 aa10.6□□□□□ -0.71
RPUSD3-209ENST00000451405 CTRLP40313 264 aa10.59□□□□□ -0.71
RPUSD3-209ENST00000451405 TWIST1Q15672 202 aa10.59□□□□□ -0.71
RPUSD3-209ENST00000451405 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
RPUSD3-209ENST00000451405 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
RPUSD3-209ENST00000451405 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 FOXA3P55318 350 aaPredicted RBP10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 GTSF1Q8WW33 167 aa10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 PGLYRP4Q96LB8 373 aa10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 RPP21Q9H633 154 aaKnown RBP10.58□□□□□ -0.72
RPUSD3-209ENST00000451405 TRAV26-2A0A0B4J265 109 aa10.57□□□□□ -0.72
RPUSD3-209ENST00000451405 PANO1I0J062 215 aa10.57□□□□□ -0.72
RPUSD3-209ENST00000451405 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
RPUSD3-209ENST00000451405 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.56□□□□□ -0.72
RPUSD3-209ENST00000451405 ALKAL2Q6UX46 152 aa10.55□□□□□ -0.72
RPUSD3-209ENST00000451405 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
RPUSD3-209ENST00000451405 TRAV8-4A0A0B4J246 113 aa10.54□□□□□ -0.72
RPUSD3-209ENST00000451405 SLPIP03973 132 aa10.54□□□□□ -0.72
RPUSD3-209ENST00000451405 COTL1Q14019 142 aa10.54□□□□□ -0.72
RPUSD3-209ENST00000451405 CLRN3Q8NCR9 226 aa10.54□□□□□ -0.72
RPUSD3-209ENST00000451405 RPL39LQ96EH5 51 aaKnown RBP10.54□□□□□ -0.72
RPUSD3-209ENST00000451405 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
RPUSD3-209ENST00000451405 AMTP48728 403 aa10.53□□□□□ -0.72
RPUSD3-209ENST00000451405 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
RPUSD3-209ENST00000451405 LYPD6BQ8NI32 183 aa10.53□□□□□ -0.72
RPUSD3-209ENST00000451405 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
RPUSD3-209ENST00000451405 UBE2L6O14933 153 aa10.52□□□□□ -0.73
RPUSD3-209ENST00000451405 GATCO43716 136 aaKnown RBP10.52□□□□□ -0.73
RPUSD3-209ENST00000451405 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
RPUSD3-209ENST00000451405 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
RPUSD3-209ENST00000451405 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
RPUSD3-209ENST00000451405 HNRNPA3P51991 378 aaKnown RBP10.5□□□□□ -0.73
RPUSD3-209ENST00000451405 CEBPGP53567 150 aa10.5□□□□□ -0.73
RPUSD3-209ENST00000451405 FAM231DQ6ZW35 169 aa10.5□□□□□ -0.73
RPUSD3-209ENST00000451405 RNF213Q63HN8 5207 aa10.49□□□□□ -0.73
RPUSD3-209ENST00000451405 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
RPUSD3-209ENST00000451405 A8MWL6 223 aa10.49□□□□□ -0.73
RPUSD3-209ENST00000451405 GAS8-AS1O95177 125 aa10.49□□□□□ -0.73
RPUSD3-209ENST00000451405 RPL37AP61513 92 aaKnown RBP10.49□□□□□ -0.73
RPUSD3-209ENST00000451405 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
RPUSD3-209ENST00000451405 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
RPUSD3-209ENST00000451405 GAGE12HA6NDE8 117 aa10.48□□□□□ -0.73
RPUSD3-209ENST00000451405 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
RPUSD3-209ENST00000451405 FAM231BA6NCW3 169 aa10.47□□□□□ -0.73
RPUSD3-209ENST00000451405 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
RPUSD3-209ENST00000451405 CIRBPQ14011 172 aaKnown RBP10.47□□□□□ -0.73
RPUSD3-209ENST00000451405 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
RPUSD3-209ENST00000451405 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
RPUSD3-209ENST00000451405 NCR2O95944 276 aa10.46□□□□□ -0.73
RPUSD3-209ENST00000451405 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
RPUSD3-209ENST00000451405 AMMECR1LQ6DCA0 310 aa10.46□□□□□ -0.73
RPUSD3-209ENST00000451405 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.73
RPUSD3-209ENST00000451405 APCSP02743 223 aa10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 FGF6P10767 208 aa10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 PMCHP20382 165 aa10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 CT83Q5H943 113 aa10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 RNASEKQ6P5S7 137 aaKnown RBP10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 TEX261Q6UWH6 196 aa10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 LINC01551Q86U37 167 aa10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 EIF5A2Q9GZV4 153 aaKnown RBP10.45□□□□□ -0.74
RPUSD3-209ENST00000451405 TRBV6-5A0A0K0K1A5 114 aa10.44□□□□□ -0.74
RPUSD3-209ENST00000451405 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
RPUSD3-209ENST00000451405 CHCHD10Q8WYQ3 142 aaPredicted RBP10.44□□□□□ -0.74
RPUSD3-209ENST00000451405 DPH3Q96FX2 82 aa10.44□□□□□ -0.74
RPUSD3-209ENST00000451405 RNF185Q96GF1 192 aa10.44□□□□□ -0.74
RPUSD3-209ENST00000451405 SMIM7Q9BQ49 75 aa10.44□□□□□ -0.74
RPUSD3-209ENST00000451405 A0A087WYN8 130 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 HIGD1CA8MV81 97 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 H7C423 109 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 I3L3M4 83 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 FAM210AQ96ND0 272 aa10.43□□□□□ -0.74
RPUSD3-209ENST00000451405 A0A1B0GUT8 65 aa10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 TSHBP01222 138 aa10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 ESDP10768 282 aa10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 RAB4AP20338 218 aa10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
RPUSD3-209ENST00000451405 ZNF727A8MUV8 499 aa10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 NDUFS6O75380 124 aaKnown RBP10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 FOXI1Q12951 378 aa10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 SPACA4Q8TDM5 124 aa10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 OSTCQ9NRP0 149 aa10.41□□□□□ -0.74
RPUSD3-209ENST00000451405 A0A1B0GVG6 124 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 COX6A2Q02221 97 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 AMN1Q8IY45 258 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 OR5A1Q8NGJ0 315 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 PRSS3P2Q8NHM4 247 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
RPUSD3-209ENST00000451405 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms