RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 PPBPP02775 128 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 LINC00694P0DN24 101 aa4.73□□□□□ -1.65
USP46-202ENST00000451218 TRBV27A0A0K0K1C4 114 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 hDV102S1A0JD36 115 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 ZNF705AQ6ZN79 300 aaPredicted RBP4.72□□□□□ -1.65
USP46-202ENST00000451218 NDUFA11Q86Y39 141 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 SMIM2Q9BVW6 85 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 HSBP1O75506 76 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 CKS2P33552 79 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 TOMM6Q96B49 74 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 ATRQ13535 2644 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 H3BQ85 93 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 DKK2Q9UBU2 259 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 X6R8D5 127 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 WNK1Q9H4A3 2382 aa4.72□□□□□ -1.65
USP46-202ENST00000451218 IGLV4-69A0A075B6H9 119 aa4.71□□□□□ -1.65
USP46-202ENST00000451218 A0A1B0GWB2 263 aa4.71□□□□□ -1.65
USP46-202ENST00000451218 MEIG1Q5JSS6 88 aa4.71□□□□□ -1.65
USP46-202ENST00000451218 PIK3CD-AS1Q5SR53 167 aa4.71□□□□□ -1.65
USP46-202ENST00000451218 CFAP126Q5VTH2 177 aa4.71□□□□□ -1.65
USP46-202ENST00000451218 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.71□□□□□ -1.66
USP46-202ENST00000451218 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 SPATA25Q9BR10 227 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 HSPB8Q9UJY1 196 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 PHLDA3Q9Y5J5 127 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 LEPROTL1O95214 131 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 NEGR1Q7Z3B1 354 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 NEXN-AS1Q8NBZ9 246 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 C20orf78Q9BR46 151 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 PLA2G2DQ9UNK4 145 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 A0A087WWL8 130 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 RIPPLY3P57055 190 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 LGALS9BQ3B8N2 356 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 LGALS9CQ6DKI2 356 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 PRIMA1Q86XR5 153 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 LINC00612Q8N6U2 182 aa4.71□□□□□ -1.66
USP46-202ENST00000451218 HBDP02042 147 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
USP46-202ENST00000451218 C9orf66Q5T8R8 295 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 INSL3P51460 131 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 SPATA45Q537H7 98 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 KMT2AQ03164 3969 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 AMELXQ99217 191 aa4.7□□□□□ -1.66
USP46-202ENST00000451218 CCL18P55774 89 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 BOD1L2Q8IYS8 172 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 MTURNQ8N3F0 131 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 HIVEP2P31629 2446 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 RAB37Q96AX2 223 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 LINC01587Q99440 93 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 HECTD4Q9Y4D8 3996 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.66
USP46-202ENST00000451218 RS1O15537 224 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 CHCHD7Q9BUK0 85 aa4.69□□□□□ -1.66
USP46-202ENST00000451218 OR11H12B2RN74 326 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 WFDC9Q8NEX5 89 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 BAALCQ8WXS3 180 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 MAP1LC3AQ9H492 121 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 MRPL16Q9NX20 251 aaKnown RBP4.68□□□□□ -1.66
USP46-202ENST00000451218 PRSS29PA6NIE9 313 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 RHODO00212 210 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 MGPP08493 103 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 VPREB1P12018 145 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 RPL36AP83881 106 aaKnown RBP4.68□□□□□ -1.66
USP46-202ENST00000451218 NSUN5P1Q3KNT7 163 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 ZC2HC1BQ5TFG8 222 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 SBSPONQ8IVN8 264 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 RPL36ALQ969Q0 106 aaKnown RBP4.68□□□□□ -1.66
USP46-202ENST00000451218 NOTCH2Q04721 2471 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 HTN3P15516 51 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 RPL39P62891 51 aaKnown RBP4.68□□□□□ -1.66
USP46-202ENST00000451218 ZFP2Q6ZN57 461 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 FLNBO75369 2602 aaKnown RBP4.68□□□□□ -1.66
USP46-202ENST00000451218 SAP30O75446 220 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
USP46-202ENST00000451218 LAGE3Q14657 143 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 KRTAP24-1Q3LI83 254 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 IFI27L1Q96BM0 104 aa4.68□□□□□ -1.66
USP46-202ENST00000451218 STAB1Q9NY15 2570 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 A6NDN8 102 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 TRIAP1O43715 76 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 NTM-AS1Q6ZSK4 140 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 MRPL52Q86TS9 123 aaKnown RBP4.67□□□□□ -1.66
USP46-202ENST00000451218 F8P00451 2351 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 TRAV12-1A0A0B4J245 112 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 K7EMI3 77 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 ZNF415Q09FC8 603 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 NFE4Q86UQ8 179 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 STPG4Q8N801 248 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 ZNRF2Q8NHG8 242 aa4.67□□□□□ -1.66
USP46-202ENST00000451218 DEFB104AQ8WTQ1 72 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms