RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TRAV8-4A0A0B4J246 113 aa17.39■□□□□ 0.37
USP42-204ENST00000451154 hDV102S1A0JD36 115 aa17.39■□□□□ 0.37
USP42-204ENST00000451154 BCL2P10415 239 aa17.38■□□□□ 0.37
USP42-204ENST00000451154 HNRNPA3P51991 378 aaKnown RBP17.38■□□□□ 0.37
USP42-204ENST00000451154 PGLYRP4Q96LB8 373 aa17.38■□□□□ 0.37
USP42-204ENST00000451154 SERTAD4-AS1Q5TG53 156 aa17.37■□□□□ 0.37
USP42-204ENST00000451154 WDR73Q6P4I2 378 aa17.37■□□□□ 0.37
USP42-204ENST00000451154 UBE2L6O14933 153 aa17.36■□□□□ 0.37
USP42-204ENST00000451154 TWIST1Q15672 202 aa17.36■□□□□ 0.37
USP42-204ENST00000451154 SLPIP03973 132 aa17.35■□□□□ 0.37
USP42-204ENST00000451154 CTRLP40313 264 aa17.35■□□□□ 0.37
USP42-204ENST00000451154 AMTP48728 403 aa17.35■□□□□ 0.37
USP42-204ENST00000451154 CNBPP62633 177 aaKnown RBP17.35■□□□□ 0.37
USP42-204ENST00000451154 COTL1Q14019 142 aa17.35■□□□□ 0.37
USP42-204ENST00000451154 RNASE7Q9H1E1 156 aaKnown RBP17.34■□□□□ 0.37
USP42-204ENST00000451154 GATD1Q8NB37 220 aa17.33■□□□□ 0.36
USP42-204ENST00000451154 TRAV26-2A0A0B4J265 109 aa17.32■□□□□ 0.36
USP42-204ENST00000451154 SLC51BQ86UW2 128 aa17.32■□□□□ 0.36
USP42-204ENST00000451154 OCC1Q8TAD7 63 aa17.32■□□□□ 0.36
USP42-204ENST00000451154 DPH3Q96FX2 82 aa17.32■□□□□ 0.36
USP42-204ENST00000451154 RPP21Q9H633 154 aaKnown RBP17.32■□□□□ 0.36
USP42-204ENST00000451154 AP5S1Q9NUS5 200 aa17.32■□□□□ 0.36
USP42-204ENST00000451154 K7EN84 100 aa17.31■□□□□ 0.36
USP42-204ENST00000451154 CNFNQ9BYD5 112 aa17.31■□□□□ 0.36
USP42-204ENST00000451154 IGHV3-64A0A075B6Q5 118 aa17.3■□□□□ 0.36
USP42-204ENST00000451154 CIRBPQ14011 172 aaKnown RBP17.3■□□□□ 0.36
USP42-204ENST00000451154 TCTE3Q8IZS6 198 aa17.3■□□□□ 0.36
USP42-204ENST00000451154 IGKV3OR2-268A0A0C4DH90 116 aa17.29■□□□□ 0.36
USP42-204ENST00000451154 FOXA3P55318 350 aaPredicted RBP17.29■□□□□ 0.36
USP42-204ENST00000451154 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.28■□□□□ 0.36
USP42-204ENST00000451154 GAGE12HA6NDE8 117 aa17.28■□□□□ 0.36
USP42-204ENST00000451154 CHTF8P0CG12 524 aa17.28■□□□□ 0.36
USP42-204ENST00000451154 TAGLN2P37802 199 aaKnown RBP17.27■□□□□ 0.36
USP42-204ENST00000451154 GTSF1Q8WW33 167 aa17.27■□□□□ 0.36
USP42-204ENST00000451154 RPL39LQ96EH5 51 aaKnown RBP17.27■□□□□ 0.36
USP42-204ENST00000451154 Q6ZNX1 250 aa17.26■□□□□ 0.35
USP42-204ENST00000451154 C15orf56Q8N910 161 aa17.25■□□□□ 0.35
USP42-204ENST00000451154 UBR4Q5T4S7 5183 aa17.25■□□□□ 0.35
USP42-204ENST00000451154 A0A087WYN8 130 aa17.24■□□□□ 0.35
USP42-204ENST00000451154 AMMECR1LQ6DCA0 310 aa17.23■□□□□ 0.35
USP42-204ENST00000451154 CFAP161Q6P656 301 aa17.23■□□□□ 0.35
USP42-204ENST00000451154 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.22■□□□□ 0.35
USP42-204ENST00000451154 IGKV2-29A2NJV5 120 aaPredicted RBP17.22■□□□□ 0.35
USP42-204ENST00000451154 RNASEKQ6P5S7 137 aaKnown RBP17.22■□□□□ 0.35
USP42-204ENST00000451154 SMIM15Q7Z3B0 74 aa17.22■□□□□ 0.35
USP42-204ENST00000451154 HIGD2BQ4VC39 106 aa17.21■□□□□ 0.35
USP42-204ENST00000451154 SPACA4Q8TDM5 124 aa17.21■□□□□ 0.35
USP42-204ENST00000451154 CHCHD10Q8WYQ3 142 aaPredicted RBP17.21■□□□□ 0.35
USP42-204ENST00000451154 RNF185Q96GF1 192 aa17.21■□□□□ 0.35
USP42-204ENST00000451154 PLA2G2DQ9UNK4 145 aa17.21■□□□□ 0.35
USP42-204ENST00000451154 GATCO43716 136 aaKnown RBP17.2■□□□□ 0.34
USP42-204ENST00000451154 NCR2O95944 276 aa17.2■□□□□ 0.34
USP42-204ENST00000451154 COX6A2Q02221 97 aa17.19■□□□□ 0.34
USP42-204ENST00000451154 SDHAF1A6NFY7 115 aa17.18■□□□□ 0.34
USP42-204ENST00000451154 APCSP02743 223 aa17.18■□□□□ 0.34
USP42-204ENST00000451154 FGF6P10767 208 aa17.18■□□□□ 0.34
USP42-204ENST00000451154 RPS10P46783 165 aaKnown RBP17.18■□□□□ 0.34
USP42-204ENST00000451154 TEX261Q6UWH6 196 aa17.17■□□□□ 0.34
USP42-204ENST00000451154 A8MWL6 223 aa17.16■□□□□ 0.34
USP42-204ENST00000451154 H7C423 109 aa17.16■□□□□ 0.34
USP42-204ENST00000451154 Q6ZRU5 148 aa17.16■□□□□ 0.34
USP42-204ENST00000451154 PLAC8Q9NZF1 115 aa17.16■□□□□ 0.34
USP42-204ENST00000451154 FAM231BA6NCW3 169 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 TMEM250H0YL14 139 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 MT1HL1P0DM35 61 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 PMCHP20382 165 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 CEBPGP53567 150 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 ALKAL2Q6UX46 152 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 FAM231DQ6ZW35 169 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 PRSS3P2Q8NHM4 247 aa17.15■□□□□ 0.34
USP42-204ENST00000451154 GAS8-AS1O95177 125 aa17.14■□□□□ 0.33
USP42-204ENST00000451154 BLOC1S1P78537 153 aa17.14■□□□□ 0.33
USP42-204ENST00000451154 I3L3M4 83 aa17.13■□□□□ 0.33
USP42-204ENST00000451154 FOXI1Q12951 378 aa17.13■□□□□ 0.33
USP42-204ENST00000451154 IGKV2-24A0A0C4DH68 120 aa17.12■□□□□ 0.33
USP42-204ENST00000451154 PHOX2AO14813 284 aa17.12■□□□□ 0.33
USP42-204ENST00000451154 MAJINQ3KP22 176 aa17.12■□□□□ 0.33
USP42-204ENST00000451154 NDUFS6O75380 124 aaKnown RBP17.11■□□□□ 0.33
USP42-204ENST00000451154 OR5A1Q8NGJ0 315 aa17.11■□□□□ 0.33
USP42-204ENST00000451154 GVQW2A0A096LPI5 108 aaPredicted RBP17.1■□□□□ 0.33
USP42-204ENST00000451154 TRBV6-5A0A0K0K1A5 114 aa17.1■□□□□ 0.33
USP42-204ENST00000451154 XCL1P47992 114 aa17.1■□□□□ 0.33
USP42-204ENST00000451154 LYPD6BQ8NI32 183 aa17.1■□□□□ 0.33
USP42-204ENST00000451154 TSHBP01222 138 aa17.09■□□□□ 0.33
USP42-204ENST00000451154 ZNF25P17030 456 aaPredicted RBP17.09■□□□□ 0.33
USP42-204ENST00000451154 C7orf33Q8WU49 177 aa17.09■□□□□ 0.33
USP42-204ENST00000451154 TMEM101Q96IK0 257 aa17.09■□□□□ 0.33
USP42-204ENST00000451154 BTF3L4Q96K17 158 aa17.09■□□□□ 0.33
USP42-204ENST00000451154 ST20Q9HBF5 79 aa17.09■□□□□ 0.33
USP42-204ENST00000451154 ESDP10768 282 aa17.08■□□□□ 0.32
USP42-204ENST00000451154 CT83Q5H943 113 aa17.08■□□□□ 0.32
USP42-204ENST00000451154 BORCS7Q96B45 105 aa17.08■□□□□ 0.32
USP42-204ENST00000451154 LINC00959A0A1B0GUT2 108 aa17.07■□□□□ 0.32
USP42-204ENST00000451154 TMEM242Q9NWH2 141 aa17.07■□□□□ 0.32
USP42-204ENST00000451154 CCL25O15444 150 aa17.06■□□□□ 0.32
USP42-204ENST00000451154 AKAP14Q86UN6 197 aa17.06■□□□□ 0.32
USP42-204ENST00000451154 STPG4Q8N801 248 aa17.06■□□□□ 0.32
USP42-204ENST00000451154 LINC00526Q96FQ7 95 aa17.06■□□□□ 0.32
USP42-204ENST00000451154 A0A1B0GUT8 65 aa17.05■□□□□ 0.32
USP42-204ENST00000451154 HIGD1CA8MV81 97 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms