RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
SHANK2-210ENST00000449116 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 RAB5BP61020 215 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-210ENST00000449116 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 UBE2DNLQ8IWF7 75 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
SHANK2-210ENST00000449116 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 NIT1Q86X76 327 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 CHCHD7Q9BUK0 85 aa10.04□□□□□ -0.8
SHANK2-210ENST00000449116 LYSTQ99698 3801 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 LINC00614P0C842 121 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 ESDP10768 282 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 LAGE3Q14657 143 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
SHANK2-210ENST00000449116 UBE2L6O14933 153 aa10.02□□□□□ -0.81
SHANK2-210ENST00000449116 LGALS9CQ6DKI2 356 aa10.02□□□□□ -0.81
SHANK2-210ENST00000449116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
SHANK2-210ENST00000449116 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
SHANK2-210ENST00000449116 H7C423 109 aa10.01□□□□□ -0.81
SHANK2-210ENST00000449116 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
SHANK2-210ENST00000449116 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
SHANK2-210ENST00000449116 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
SHANK2-210ENST00000449116 TMEM18Q96B42 140 aa10.01□□□□□ -0.81
SHANK2-210ENST00000449116 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
SHANK2-210ENST00000449116 KMT2CQ8NEZ4 4911 aaKnown RBP10□□□□□ -0.81
SHANK2-210ENST00000449116 TENM2Q9NT68 2774 aa10□□□□□ -0.81
SHANK2-210ENST00000449116 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
SHANK2-210ENST00000449116 PKIAP61925 76 aa10□□□□□ -0.81
SHANK2-210ENST00000449116 GAGE6Q13070 117 aa10□□□□□ -0.81
SHANK2-210ENST00000449116 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
SHANK2-210ENST00000449116 RYR3Q15413 4870 aa10□□□□□ -0.81
SHANK2-210ENST00000449116 TMEM262E9PQX1 116 aa9.99□□□□□ -0.81
SHANK2-210ENST00000449116 SIVA1O15304 175 aa9.99□□□□□ -0.81
SHANK2-210ENST00000449116 G0S2P27469 103 aa9.99□□□□□ -0.81
SHANK2-210ENST00000449116 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
SHANK2-210ENST00000449116 Q9H8V8 135 aa9.99□□□□□ -0.81
SHANK2-210ENST00000449116 SERF1AO75920 110 aa9.98□□□□□ -0.81
SHANK2-210ENST00000449116 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
SHANK2-210ENST00000449116 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
SHANK2-210ENST00000449116 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
SHANK2-210ENST00000449116 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
SHANK2-210ENST00000449116 A0A087WX48 190 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 HSBP1O75506 76 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 LY6G6CO95867 125 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 FGF6P10767 208 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 LINC00310P59036 64 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 RPL39P62891 51 aaKnown RBP9.97□□□□□ -0.81
SHANK2-210ENST00000449116 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 LINC01556Q5JQF7 62 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 AMMECR1LQ6DCA0 310 aa9.97□□□□□ -0.81
SHANK2-210ENST00000449116 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.81
SHANK2-210ENST00000449116 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
SHANK2-210ENST00000449116 HBDP02042 147 aa9.96□□□□□ -0.82
SHANK2-210ENST00000449116 ZNF25P17030 456 aaPredicted RBP9.96□□□□□ -0.82
SHANK2-210ENST00000449116 NDUFA6P56556 154 aa9.96□□□□□ -0.82
SHANK2-210ENST00000449116 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
SHANK2-210ENST00000449116 COA6Q5JTJ3 125 aaKnown RBP9.96□□□□□ -0.82
SHANK2-210ENST00000449116 MRPL52Q86TS9 123 aaKnown RBP9.96□□□□□ -0.82
SHANK2-210ENST00000449116 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
SHANK2-210ENST00000449116 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
SHANK2-210ENST00000449116 A0A096LNJ9 63 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 NUPR1O60356 82 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 IGHV3-30P01768 117 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 IGHV3-30-3P0DP02 117 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 IGHV3-30-5P0DP03 117 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 RBX1P62877 108 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 PMCHL1Q16048 86 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 Q8N3U1 123 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 TMEM101Q96IK0 257 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
SHANK2-210ENST00000449116 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
SHANK2-210ENST00000449116 Q8N976 141 aa9.94□□□□□ -0.82
SHANK2-210ENST00000449116 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
SHANK2-210ENST00000449116 K7EP13 123 aa9.93□□□□□ -0.82
SHANK2-210ENST00000449116 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
SHANK2-210ENST00000449116 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
SHANK2-210ENST00000449116 PYGO1Q9Y3Y4 419 aa9.93□□□□□ -0.82
SHANK2-210ENST00000449116 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
SHANK2-210ENST00000449116 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
SHANK2-210ENST00000449116 S100A6P06703 90 aa9.92□□□□□ -0.82
SHANK2-210ENST00000449116 C10orf126Q8N4M7 172 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms