RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 MRPL51Q4U2R6 128 aaKnown RBP9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 IMMP2LQ96T52 175 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 KLK12Q9UKR0 248 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 CARHSP1Q9Y2V2 147 aaKnown RBP9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 GAS8-AS1O95177 125 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 APCSP02743 223 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 S100PP25815 95 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 MPV17L2Q567V2 206 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 C10orf91Q5T1B1 145 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 RMI2Q96E14 147 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
GTF3C3-206ENST00000448539 EREGO14944 169 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 CRPP02741 224 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 RPS10P46783 165 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 RHEBQ15382 184 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 UBE2WQ96B02 151 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
GTF3C3-206ENST00000448539 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 C7orf77A4D0Y5 90 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 VCYO14598 125 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 RBX1P62877 108 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 Q0VG73 95 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 Q8N976 141 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 RPS10P5Q9NQ39 176 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
GTF3C3-206ENST00000448539 TRAV9-1A0A075B6T8 112 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 D6R8Y8 96 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 APOC3P02656 99 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 PPBPP02775 128 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 NRACQ8N912 160 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 PKD1P98161 4303 aa9.4□□□□□ -0.9
GTF3C3-206ENST00000448539 PKHD1P08F94 4074 aa9.4□□□□□ -0.91
GTF3C3-206ENST00000448539 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 TRBV27A0A0K0K1C4 114 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 FCER1GP30273 86 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 ORMDL3Q8N138 153 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 KIR2DL4Q99706 377 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 C20orf78Q9BR46 151 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
GTF3C3-206ENST00000448539 A0A1B0GUV1 79 aa9.38□□□□□ -0.91
GTF3C3-206ENST00000448539 H7C423 109 aa9.38□□□□□ -0.91
GTF3C3-206ENST00000448539 SNAPINO95295 136 aa9.38□□□□□ -0.91
GTF3C3-206ENST00000448539 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
GTF3C3-206ENST00000448539 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
GTF3C3-206ENST00000448539 SVBPQ8N300 66 aa9.38□□□□□ -0.91
GTF3C3-206ENST00000448539 TRBV24-1A0A075B6N3 115 aa9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 PHOX2AO14813 284 aa9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 TSHBP01222 138 aa9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 RNASEKQ6P5S7 137 aaKnown RBP9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 LINC00269Q8N2A0 174 aa9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 PRELID3AQ96N28 172 aa9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
GTF3C3-206ENST00000448539 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 A0A087WTM6 91 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 TCAPO15273 167 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 NPYP01303 97 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 MIAQ16674 131 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 CLPSL2Q6UWE3 100 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
GTF3C3-206ENST00000448539 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
GTF3C3-206ENST00000448539 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
GTF3C3-206ENST00000448539 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
GTF3C3-206ENST00000448539 FGF6P10767 208 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 ESDP10768 282 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 ZNF25P17030 456 aaPredicted RBP9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 REG3AQ06141 175 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 COX19Q49B96 90 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 TMEM18Q96B42 140 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 SMIM2Q9BVW6 85 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
GTF3C3-206ENST00000448539 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
GTF3C3-206ENST00000448539 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
GTF3C3-206ENST00000448539 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
GTF3C3-206ENST00000448539 MAP1LC3AQ9H492 121 aa9.33□□□□□ -0.92
GTF3C3-206ENST00000448539 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
GTF3C3-206ENST00000448539 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
GTF3C3-206ENST00000448539 RAB5AP20339 215 aa9.32□□□□□ -0.92
GTF3C3-206ENST00000448539 DGAT2L7PQ6IED9 249 aa9.32□□□□□ -0.92
GTF3C3-206ENST00000448539 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
GTF3C3-206ENST00000448539 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
GTF3C3-206ENST00000448539 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
GTF3C3-206ENST00000448539 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms