RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
SYNPO2-204ENST00000448416 KLLNB2CW77 178 aa6.92□□□□□ -1.3
SYNPO2-204ENST00000448416 SPTBN2O15020 2390 aa6.92□□□□□ -1.3
SYNPO2-204ENST00000448416 APC2O95996 2303 aa6.92□□□□□ -1.3
SYNPO2-204ENST00000448416 SYNJ2BPP57105 145 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 BEAN1Q3B7T3 259 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 Q5XG85 94 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 A0A087WVE0 104 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 KLK9Q2XQG4 91 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 Q9HAA7 133 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 KLK9Q9UKQ9 250 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 MINOS1-NBL1R4GNA1 71 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 PRIMA1Q86XR5 153 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
SYNPO2-204ENST00000448416 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
SYNPO2-204ENST00000448416 MALP21145 153 aa6.9□□□□□ -1.3
SYNPO2-204ENST00000448416 MRAPQ8TCY5 172 aa6.9□□□□□ -1.3
SYNPO2-204ENST00000448416 C9orf85Q96MD7 179 aa6.9□□□□□ -1.3
SYNPO2-204ENST00000448416 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
SYNPO2-204ENST00000448416 USP17L23D6RBM5 183 aa6.9□□□□□ -1.31
SYNPO2-204ENST00000448416 NDUFA1O15239 70 aa6.9□□□□□ -1.31
SYNPO2-204ENST00000448416 SPTBN1Q01082 2364 aaKnown RBP6.9□□□□□ -1.31
SYNPO2-204ENST00000448416 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.31
SYNPO2-204ENST00000448416 TRBV12-3P01733 135 aa6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 Q9H8V8 135 aa6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 IGKV3-20P01619 116 aa6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 Q6JHZ5 121 aa6.89□□□□□ -1.31
SYNPO2-204ENST00000448416 TRAV12-2A0A075B6T6 113 aa6.88□□□□□ -1.31
SYNPO2-204ENST00000448416 IGHV3-73A0A0B4J1V6 119 aa6.88□□□□□ -1.31
SYNPO2-204ENST00000448416 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
SYNPO2-204ENST00000448416 NDUFA4O00483 81 aa6.88□□□□□ -1.31
SYNPO2-204ENST00000448416 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
SYNPO2-204ENST00000448416 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 FAM223BA6NKX1 122 aa6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 FAM223AQ8IWN6 122 aa6.87□□□□□ -1.31
SYNPO2-204ENST00000448416 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 UCNP55089 124 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 IGFL3Q6UXB1 125 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 UBE2D4Q9Y2X8 147 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 IGHV1OR15-1A0A075B7D0 117 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 IGHG2P01859 326 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 FHL2Q14192 279 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 HIST2H2BCQ6DN03 193 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
SYNPO2-204ENST00000448416 PROK1P58294 105 aa6.85□□□□□ -1.31
SYNPO2-204ENST00000448416 ZNF415Q09FC8 603 aa6.85□□□□□ -1.31
SYNPO2-204ENST00000448416 DGAT2L7PQ6IED9 249 aa6.85□□□□□ -1.31
SYNPO2-204ENST00000448416 PFN2P35080 140 aa6.84□□□□□ -1.31
SYNPO2-204ENST00000448416 C9orf129Q5T035 196 aaKnown RBP6.84□□□□□ -1.31
SYNPO2-204ENST00000448416 PTPRQQ9UMZ3 2332 aa6.84□□□□□ -1.31
SYNPO2-204ENST00000448416 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
SYNPO2-204ENST00000448416 LRBAP50851 2863 aa6.84□□□□□ -1.31
SYNPO2-204ENST00000448416 NDUFC2O95298 119 aa6.84□□□□□ -1.32
SYNPO2-204ENST00000448416 SAA4P35542 130 aa6.84□□□□□ -1.32
SYNPO2-204ENST00000448416 PIK3CD-AS1Q5SR53 167 aa6.84□□□□□ -1.32
SYNPO2-204ENST00000448416 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.84□□□□□ -1.32
SYNPO2-204ENST00000448416 C5orf56Q8N8D9 126 aa6.84□□□□□ -1.32
SYNPO2-204ENST00000448416 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.32
SYNPO2-204ENST00000448416 HTN1P15515 57 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 SPINK13Q1W4C9 94 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 LINC00467Q9BRT7 94 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 TMEM243Q9BU79 118 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 GHRHP01286 108 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 COX6A2Q02221 97 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 CRPP02741 224 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 ZFP36P26651 326 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 RPL28P46779 137 aaKnown RBP6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 PRO0628Q9UI54 55 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 TRIOBPQ9H2D6 2365 aa6.83□□□□□ -1.32
SYNPO2-204ENST00000448416 PIEZO2Q9H5I5 2752 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 K7ENP7 123 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 OVOL2Q9BRP0 275 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 SORL1Q92673 2214 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 DMXL1Q9Y485 3027 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 Q9UF83 564 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 SIRPDQ9H106 197 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 DCHS2Q6V1P9 2916 aa6.82□□□□□ -1.32
SYNPO2-204ENST00000448416 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 COL6A6A6NMZ7 2263 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 A0A087WYN8 130 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
SYNPO2-204ENST00000448416 RBMY1BA6NDE4 496 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms